HHsearch alignment for GI: 254780406 and conserved domain: COG2501

>COG2501 S4-like RNA binding protein [Replication, recombination, and repair].

Probab=97.37  E-value=0.00049  Score=45.24  Aligned_cols=63  Identities=25%  Similarity=0.307  Sum_probs=56.1

Q ss_pred             CCCCCCCHHHHHHHHHCC-CCCHHHHHHHHHCCCEEECCEECCCCCEEECCCCEEEECCEECCC
Q ss_conf             466677344788999886-877899999998698699999924068780799979999989225
Q gi|254780406|r    7 VQENFTPQRVSKVIARAG-IASRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVDGVPLRK   69 (354)
Q Consensus         7 ~~~~~~~~RL~K~la~~g-~~SRr~a~~lI~~G~V~Vng~~v~~~~~~v~~~d~v~vdg~~i~~   69 (354)
T Consensus         5 ~~i~~e~I~L~qlLK~~g~i~sGG~AK~~i~eg~V~vNGe~EtRRgkKlr~gd~V~i~~~~~~v   68 (73)
T COG2501           5 VLIKTEFITLGQLLKLAGLIESGGQAKAFIAEGEVKVNGEVETRRGKKLRDGDVVEIPGQRYQV   68 (73)
T ss_pred             EEECCCEEEHHHHHHHHCCCCCCHHHHHHHHCCEEEECCEEECCCCCEEECCCEEEECCEEEEE
T ss_conf             8721351879999987495057478889987791898886630167760169899989978999