HHsearch alignment of GI: 254780406 and MMDB domain: 1vio_A_1-57
>1vio_A (A:1-57) Ribosomal small subunit pseudouridine synthase A; structural genomics, lyase; 1.59A {Haemophilus influenzae}
Probab=99.50 E-value=2.7e-14 Score=109.41 Aligned_cols=56 Identities=27% Similarity=0.367 Sum_probs=54.3
Q ss_pred CHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEECCCCCEEECCCCEEEECCEECC
Q ss_conf 34478899988687789999999869869999992406878079997999998922
Q gi|254780406|r 13 PQRVSKVIARAGIASRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVDGVPLR 68 (354)
Q Consensus 13 ~~RL~K~la~~g~~SRr~a~~lI~~G~V~Vng~~v~~~~~~v~~~d~v~vdg~~i~ 68 (354)
++|||||||++|+|||++|++||++|+|+|||+++++++++|+++|.|.|||++|.
T Consensus 2 ~~RLDk~L~~~~~~SR~~a~~lI~~g~V~Vng~~i~~~~~~v~~~d~i~v~g~~it 57 (57)
T 1vio_A 2 SLRLDKFIAENVGLTRSQATKAIRQSAVKINGEIVKSGSVQISQEDEIYFEDELLT 57 (57)
T ss_dssp CEEHHHHHHHHHTCCHHHHHHHHHTTCEEETTEECCCTTCEECTTSCEEETTEECC
T ss_pred CHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEECCCCCEECCCCCEEEEEECCCC
T ss_conf 55899999987785899999999879789999991548958688787876203222