HHsearch results for GI: 254780406 and protein with PDBid: 1dm9_A

>1dm9_A Hypothetical 15.5 KD protein in MRCA-PCKA intergenic region; heat shock proteins, protein-RNA interactions, ribosome, structural genomics; 2.00A {Escherichia coli} SCOP: d.66.1.3 PDB: 3bbu_A

Probab=98.77  E-value=1.2e-08  Score=72.81  Aligned_cols=54  Identities=19%  Similarity=0.148  Sum_probs=48.8

Q ss_pred             CCCCCHHHHHHHHHCCCC-CHHHHHHHHHCCCEEECCEECCCCCEEECCCCEEEEC
Q ss_conf             667734478899988687-7899999998698699999924068780799979999
Q gi|254780406|r    9 ENFTPQRVSKVIARAGIA-SRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVD   63 (354)
Q Consensus         9 ~~~~~~RL~K~la~~g~~-SRr~a~~lI~~G~V~Vng~~v~~~~~~v~~~d~v~vd   63 (354)
                      +..+.+||||||..+.++ ||..|.++|..|.|+|||++++ +++.|.++|.|.|.
T Consensus         4 ~~~~~mRlD~~L~~~r~~KtRs~A~~~i~~G~V~vNg~~~K-~s~~v~~gD~i~i~   58 (133)
T 1dm9_A            4 KPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSK-PSKIVELNATLTLR   58 (133)
T ss_dssp             -CTTCCBHHHHHHHTTSSSSHHHHHHHHHTTCEEETTEECC-TTCBCCTTCEEEEE
T ss_pred             CCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEECC-CCCCCCCCCEEEEE
T ss_conf             88886863899987162504999999998694798996467-66668899989998