HHsearch results for GI: 254780406 and protein with PDBid: 2aus_C
>2aus_C Pseudouridine synthase; isomerase, structural protein, isomerase/structural protein complex; 2.10A {Pyrococcus abyssi} PDB: 3lwr_A 3lwo_A* 3lwq_A* 3lwp_A 3lwv_A 3hax_A* 2hvy_A* 3hay_A* 2ey4_A 2rfk_A 3hjw_A* 3hjy_A
Probab=98.27 E-value=6.9e-06 Score=55.54 Aligned_cols=146 Identities=19% Similarity=0.208 Sum_probs=89.5
Q ss_pred CEEEEECCCCCEEEECCCCCCCCCCCCEEECCCCCCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEE--
Q ss_conf 438960278751563144333364421011023432002665543323202223676410001234457404775211--
Q gi|254780406|r 72 RTRLWLYHKPIGLVTTHSDPDGRSTVFDNLPSIFSRVISVGRLDINTEGLLLLTNDGGLARVLELPSTQWLRVYRVRF-- 149 (354)
Q Consensus 72 ~~~~~~~~KP~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vgRLD~~t~GLlllTndg~l~~~l~~p~~~~~k~Y~v~v-- 149 (354)
..-++++|||.|+.++..=..-+.. + ...++...|-||-..+|+|++.-.. +.++..--.+..|+|.+++
T Consensus 45 ~~G~l~i~KP~g~tS~~~v~~~k~~----~--~~~KvGH~GTLDP~AsGvL~i~ig~--aTk~~~~~~~~~K~Y~~~~~l 116 (334)
T 2aus_C 45 QYGVINLDKPPGPTSHEVVAWIKRI----L--NLEKAGHGGTLDPKVSGVLPVALER--ATRVVQALLPAGKEYVALMHL 116 (334)
T ss_dssp HTEEEEEEECSSSCHHHHHHHHHHH----T--TCSCEEESSCCCTTCEEEEEEEEGG--GGGGGGGGTTCCEEEEEEEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHH----H--CCCCCCCCCCCCCCCEEEEEEEECH--HHHHHHHHCCCCCEEEEEEEE
T ss_conf 7708999569989989999999987----3--6121379999999773789999878--986869875698189999984
Q ss_pred CCCCCHHHHHHHHHHHHCCCEEEEC-----------C---CEEEEECCCCEEEEEEEEEECCHHHHHHHHHHC------C
Q ss_conf 2455646788874000008767503-----------4---303640268807999999518428999999983------9
Q gi|254780406|r 150 HGQVDQDKLNLLKKGIVIQGICYGD-----------M---QVTLDTQKGSNAWVTVGLREGKNREIKKVFEFF------N 209 (354)
Q Consensus 150 ~~~~~~~~~~~~~~g~~~~~~~~~~-----------~---~~~~~~~~~~~~~~~v~l~eGr~~qIrr~~~~~------g 209 (354)
.+.++.+.+......+.-+-.+..| . .+.+..-......++|....|-| ||-++..+ +
T Consensus 117 ~~~~~~~~i~~~l~~f~G~i~Q~PP~~SA~K~~~R~v~I~~~ell~~~~~~~~f~v~cs~GTY--IRSL~~Dig~~Lg~~ 194 (334)
T 2aus_C 117 HGDVPEDKIRAVMKEFEGEIIQRPPLRSAVKRRLRTRKVYYIEILEIDGRDVLFRVGVEAGTY--IRSLIHHIGLALGVG 194 (334)
T ss_dssp SSCCCHHHHHHHHHHTSEEEECC------------EEEEEEEEEEEEETTEEEEEEEECTTCC--HHHHHHHHHHHHSSC
T ss_pred CCCCHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCC--HHHHHHHHHHHHCCC
T ss_conf 221017799976403622288779646523002555147899998437982899999607813--899999999885988
Q ss_pred CEEEEEEEEEECCEECCC
Q ss_conf 868688975870545187
Q gi|254780406|r 210 WKVNRLIRISYGPFQLGT 227 (354)
Q Consensus 210 ~~V~~L~Rv~~G~~~l~~ 227 (354)
-.+..|.|+++|+|.+++
T Consensus 195 a~l~~L~Rt~~G~f~~~~ 212 (334)
T 2aus_C 195 AHMAELRRTRSGPFKEDE 212 (334)
T ss_dssp EEEEEEEEEEETTEESST
T ss_pred CEEEEEEEEEECCCCHHH
T ss_conf 485131625664735899