HHsearch results for GI: 254780406 and protein with PDBid: 2cqj_A

>2cqj_A BRMS2, U3 small nucleolar ribonucleoprotein protein IMP3 homolog; S4 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.86  E-value=7.9e-06  Score=55.16  Aligned_cols=55  Identities=16%  Similarity=0.207  Sum_probs=49.0

Q ss_pred             CCCCHHHHHHHHHCCCC-CHHHHHHHHHCCCEEECCEECCCCCEEECCC--CEEEECC
Q ss_conf             67734478899988687-7899999998698699999924068780799--9799999
Q gi|254780406|r   10 NFTPQRVSKVIARAGIA-SRREVERMIAQQRVKVNGILLERAAVNVMST--DHIEVDG   64 (354)
Q Consensus        10 ~~~~~RL~K~la~~g~~-SRr~a~~lI~~G~V~Vng~~v~~~~~~v~~~--d~v~vdg   64 (354)
                      ....-|||-+|.+.|++ |+.+|.+||..|.|.|||++|+.|++.|..+  |.|++..
T Consensus         4 ~~~~RRLd~il~r~~fa~S~~~ARqlI~HghI~Vng~~V~~Ps~lV~~~~Ed~It~~~   61 (71)
T 2cqj_A            4 GSSGRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVD   61 (71)
T ss_dssp             SCCEEEHHHHHHHTTCSSSHHHHHHHHHTTCEEETTBCCCCTTCEEEHHHHTTEEESC
T ss_pred             CHHHCCHHHHHHHHCCCCCHHHHHHHHHCCEEEECCEEECCCCEEECCCCCCEEEEEC
T ss_conf             0323013789988265378999999976695999999965797695389887699967