HHsearch results for GI: 254780406 and protein with PDBid: 2olw_A
>2olw_A Ribosomal large subunit pseudouridine synthase E; bifurcated beta sheet, isomerase; 1.60A {Escherichia coli}
Probab=100.00 E-value=1.5e-44 Score=298.86 Aligned_cols=186 Identities=28% Similarity=0.465 Sum_probs=165.2
Q ss_pred CCEEECCCCEEEECCEECCCCCCEEEEECCCCCEEEECCCCCCCCCCCCEEECCCCCCEECCCCCCCCCCCEEEECCCCC
Q ss_conf 68780799979999989225564389602787515631443333644210110234320026655433232022236764
Q gi|254780406|r 50 AAVNVMSTDHIEVDGVPLRKAERTRLWLYHKPIGLVTTHSDPDGRSTVFDNLPSIFSRVISVGRLDINTEGLLLLTNDGG 129 (354)
Q Consensus 50 ~~~~v~~~d~v~vdg~~i~~~~~~~~~~~~KP~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vgRLD~~t~GLlllTndg~ 129 (354)
...+|...+.+.+++..... ++..||++|||+|++|+..|+.++.+++++++. .++++|||||++||||||||+|++
T Consensus 17 ~~~~v~~~~~~~~~~~~~~~-~~~~~iv~NKP~G~l~~~~d~~~~~tl~~~l~~--~~l~~VhRLDrdTSGLll~akd~~ 93 (217)
T 2olw_A 17 RNHQVKRFSSQRSTRRKPEN-QPTRVILFNKPYDVLPQFTDEAGRKTLKEFIPV--QGVYAAGRLDRDSEGLLVLTNNGA 93 (217)
T ss_dssp ---------------------CCCCEEEEEECTTBCSCSSCCTTSBCGGGTCCC--CSCEESSCCCTTCEEEEEEESCHH
T ss_pred CCCCCEECCCCCCCCCCCCC-CCCEEEEEECCCCEEECCCCCCCCCCHHHHCCC--CCCEECCCCCCCCCCEEEEECCHH
T ss_conf 55221044652135568888-999899998999848747799889768996684--583487557867788189827767
Q ss_pred CCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCEEEEE---------------CCCCEEEEEEEEE
Q ss_conf 1000123445740477521124556467888740000087675034303640---------------2688079999995
Q gi|254780406|r 130 LARVLELPSTQWLRVYRVRFHGQVDQDKLNLLKKGIVIQGICYGDMQVTLDT---------------QKGSNAWVTVGLR 194 (354)
Q Consensus 130 l~~~l~~p~~~~~k~Y~v~v~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---------------~~~~~~~~~v~l~ 194 (354)
++++|+++...++|+|++.|.|.++++....+..|+.+.+....++...... .....+|++++|.
T Consensus 94 ~~~~l~~~~~~i~K~Y~a~v~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~l~ 173 (217)
T 2olw_A 94 LQARLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRERKSIPTSWLKITLY 173 (217)
T ss_dssp HHHHHHCTTCCCCEEEEEEEESCCCHHHHHHHHHCCEETTEECCCCEEEEECCCTTCCCCSSCCC-CCSSCEEEEEEEES
T ss_pred HHHHHCCCCCEEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCEEEEEEEEE
T ss_conf 87653268761568999999347999999998769823786033316999526644230113688621576068999962
Q ss_pred ECCHHHHHHHHHHCCCEEEEEEEEEECCEECCCCCCCCEEECCH
Q ss_conf 18428999999983986868897587054518755474886799
Q gi|254780406|r 195 EGKNREIKKVFEFFNWKVNRLIRISYGPFQLGTLLAGSTREVSK 238 (354)
Q Consensus 195 eGr~~qIrr~~~~~g~~V~~L~Rv~~G~~~l~~L~~G~~r~l~~ 238 (354)
|||+||||+||+++||+|.+|+|++||+|.|++|++|+||+||.
T Consensus 174 tGRtHQIR~hl~~lG~pI~~L~Ri~~G~~~l~~L~~G~~r~lte 217 (217)
T 2olw_A 174 EGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREVTD 217 (217)
T ss_dssp CCCTTHHHHHHHHTTCCEEEEEEEEETTEECTTCCTTCEEECC-
T ss_pred CCCHHHHHHHHHHCCCEEEEEEEEEECCEECCCCCCCCEEECCC
T ss_conf 48549999999986997989899999998617889988087979