HHsearch results for GI: 254780406 and protein with PDBid: 2vqe_D

>2vqe_D 30S ribosomal protein S4; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: d.66.1.2 PDB: 1hnw_D* 1hnx_D* 1hnz_D* 1ibk_D* 1fka_D* 1ibm_D 1xmo_D* 1ibl_D* 1xnq_D* 1xnr_D* 1yl4_G 2b64_D* 2b9m_D* 2b9o_D* 2hgi_G 2hgp_G 2hgr_G 2hhh_D* 1xmq_D* 2j02_D* ...
Probab=98.35  E-value=8e-07  Score=61.44  Aligned_cols=53  Identities=28%  Similarity=0.464  Sum_probs=49.7

Q ss_pred             HHHHHHHHHCCCC-CHHHHHHHHHCCCEEECCEECCCCCEEECCCCEEEECCEE
Q ss_conf             4478899988687-7899999998698699999924068780799979999989
Q gi|254780406|r   14 QRVSKVIARAGIA-SRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVDGVP   66 (354)
Q Consensus        14 ~RL~K~la~~g~~-SRr~a~~lI~~G~V~Vng~~v~~~~~~v~~~d~v~vdg~~   66 (354)
                      .|||-+|-++|++ |+++|.+||..|.|.|||+.|+.|++.|.++|.|.|..+.
T Consensus        99 ~RlD~vv~r~g~a~s~~~ARQ~v~Hghv~vng~~v~ips~~~k~gd~i~~~~k~  152 (209)
T 2vqe_D           99 SRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKS  152 (209)
T ss_dssp             TBHHHHHHHTTSSSSHHHHHHHHHTTCEEETTEECCCTTCBCCTTCEEEECGGG
T ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHHCCEECCCEEECCCCEECCCCCEEEECCCC
T ss_conf             988999983475179999999987307321997973588682799999861021