HHsearch results for GI: 254780406 and protein with PDBid: 2vqe_D
>2vqe_D 30S ribosomal protein S4; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: d.66.1.2 PDB: 1hnw_D* 1hnx_D* 1hnz_D* 1ibk_D* 1fka_D* 1ibm_D 1xmo_D* 1ibl_D* 1xnq_D* 1xnr_D* 1yl4_G 2b64_D* 2b9m_D* 2b9o_D* 2hgi_G 2hgp_G 2hgr_G 2hhh_D* 1xmq_D* 2j02_D* ...
Probab=98.35 E-value=8e-07 Score=61.44 Aligned_cols=53 Identities=28% Similarity=0.464 Sum_probs=49.7
Q ss_pred HHHHHHHHHCCCC-CHHHHHHHHHCCCEEECCEECCCCCEEECCCCEEEECCEE
Q ss_conf 4478899988687-7899999998698699999924068780799979999989
Q gi|254780406|r 14 QRVSKVIARAGIA-SRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVDGVP 66 (354)
Q Consensus 14 ~RL~K~la~~g~~-SRr~a~~lI~~G~V~Vng~~v~~~~~~v~~~d~v~vdg~~ 66 (354)
.|||-+|-++|++ |+++|.+||..|.|.|||+.|+.|++.|.++|.|.|..+.
T Consensus 99 ~RlD~vv~r~g~a~s~~~ARQ~v~Hghv~vng~~v~ips~~~k~gd~i~~~~k~ 152 (209)
T 2vqe_D 99 SRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKS 152 (209)
T ss_dssp TBHHHHHHHTTSSSSHHHHHHHHHTTCEEETTEECCCTTCBCCTTCEEEECGGG
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHCCEECCCEEECCCCEECCCCCEEEECCCC
T ss_conf 988999983475179999999987307321997973588682799999861021