HHsearch results for GI: 254780406 and protein with PDBid: 3kbg_A

>3kbg_A 30S ribosomal protein S4E; RPS4E, RS4E_theac, TAR28, NESG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.75A {Thermoplasma acidophilum}

Probab=95.90  E-value=0.024  Score=33.28  Aligned_cols=53  Identities=26%  Similarity=0.340  Sum_probs=41.9

Q ss_pred             CCHHHHHHHHHC-C-CCCHHHHHHHHHCCCEEECCEECCCCCEEECCCCEEEECC
Q ss_conf             734478899988-6-8778999999986986999999240687807999799999
Q gi|254780406|r   12 TPQRVSKVIARA-G-IASRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVDG   64 (354)
Q Consensus        12 ~~~RL~K~la~~-g-~~SRr~a~~lI~~G~V~Vng~~v~~~~~~v~~~d~v~vdg   64 (354)
                      +++=|.=+|-+. + --+.|||...+.+|.|.|||++.++..+.|---|+|++.+
T Consensus         6 ~siPL~iiLRd~Lk~A~t~rEak~Il~~~~V~VDGkvr~d~k~PvGlmDVisi~~   60 (213)
T 3kbg_A            6 QSVTLLSIIRDYLKLSDKEREAARILANGLVKVDGKTVREKKFAVGFMDVIEING   60 (213)
T ss_dssp             SCEEHHHHHHHHHHTTTCGGGHHHHHHTTCEEETTEECCCTTCEECTTCEEEETT
T ss_pred             CCCCEEHHHHHHHCCCCCHHHHHHHHHCCEEEECCEEECCCCCCCCEEEEEEECC
T ss_conf             2665405531353412657999999868938989999644899874378999789