HHSEARCH alignment of GI: 254780406 and SCOP domain: d1dm9a_

Alignment

Probab=98.74  E-value=1e-08  Score=71.86  Aligned_cols=52  Identities=19%  Similarity=0.152  Sum_probs=47.4

Q ss_pred             CCCHHHHHHHHHCCCC-CHHHHHHHHHCCCEEECCEECCCCCEEECCCCEEEEC
Q ss_conf             7734478899988687-7899999998698699999924068780799979999
Q gi|254780406|r   11 FTPQRVSKVIARAGIA-SRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVD   63 (354)
Q Consensus        11 ~~~~RL~K~la~~g~~-SRr~a~~lI~~G~V~Vng~~v~~~~~~v~~~d~v~vd   63 (354)
                      ...+||||||..++++ ||..|.++|..|.|.|||++++ +++.|.++|+|+|.
T Consensus         2 ~~~mRlD~~L~~~r~~ktR~~A~~~i~~G~V~vNg~~vK-ps~~vk~GDvI~i~   54 (104)
T d1dm9a_           2 AVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSK-PSKIVELNATLTLR   54 (104)
T ss_dssp             TTCCBHHHHHHHTTSSSSHHHHHHHHHTTCEEETTEECC-TTCBCCTTCEEEEE
T ss_pred             CCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEECC-CCCCCCCCCEEEEE
T ss_conf             763768999998221720999999998397154874145-55568999999998

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-L RNA-binding motif
superfamily: Alpha-L RNA-binding motif
family: Heat shock protein 15 kD
domain: Heat shock protein 15 kD
species: Escherichia coli [TaxId: 562]