HHSEARCH alignment of GI: 254780406 and SCOP domain: d1jh3a_

Alignment

Probab=97.51  E-value=3.7e-05  Score=49.46  Aligned_cols=64  Identities=19%  Similarity=0.351  Sum_probs=49.8

Q ss_pred             CCHHHHHHHHHCCCC-CHHHHHHHHHCCCEEECCEECCCCCEEECCCCEEEECCE--ECCCCCCEEEEE
Q ss_conf             734478899988687-789999999869869999992406878079997999998--922556438960
Q gi|254780406|r   12 TPQRVSKVIARAGIA-SRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVDGV--PLRKAERTRLWL   77 (354)
Q Consensus        12 ~~~RL~K~la~~g~~-SRr~a~~lI~~G~V~Vng~~v~~~~~~v~~~d~v~vdg~--~i~~~~~~~~~~   77 (354)
                      +..-|-.+|..+|+| |++||.++|++|-|+|||+.|+++.+.+...|.  ++|+  .|..-++.++++
T Consensus        30 ~~~~l~~ll~~~~l~~S~seaRrlI~~ggv~iN~~kv~d~~~~l~~~~~--~~~~~~ll~~GKK~~~~i   96 (99)
T d1jh3a_          30 GDVPLVELLVSAGISPSKRQAREDIQNGAIYVNGERLQDVGAILTAEHR--LEGRFTVIRRGKKKYYLI   96 (99)
T ss_dssp             SCCCHHHHHHHHTSCCSHHHHHHHHHSTTEEETTEECCSTTTCCSSTTT--SSSSEEEEEETTSCEEEE
T ss_pred             CCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCCCCHHHC--CCCCEEEEEECCCCEEEE
T ss_conf             9987999999848876889999999859989999993281220177570--489789998618878999

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-L RNA-binding motif
superfamily: Alpha-L RNA-binding motif
family: Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain
domain: Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain
species: Bacillus stearothermophilus [TaxId: 1422]