PSIBLAST alignment of GI: 254780406 and protein with PDB id: 3dh3
gi|228312012|pdb|3DH3|A Chain A, Crystal Structure Of Rluf In Complex With A 22 Nucleotide Rna Substrate Length = 290
>gi|228312014|pdb|3DH3|B Chain B, Crystal Structure Of Rluf In Complex With A 22 Nucleotide Rna Substrate Length = 290
Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats.
Identities = 63/292 (21%), Positives = 117/292 (40%), Gaps = 5/292 (1%)
Query: 11 FTPQRVSKVIARAGIASRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVDGVPLRKA 70
+ R++K I+ +GI SRRE +R I Q V +NG V D ++V+G +
Sbjct: 4 DSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRAT-IGDQVKPGDVVKVNGQLIEPR 62
Query: 71 ERTRLWLYHKPIGLVTTHSDPDGRSTVFDNLPSIFSRVISVGRLDINTEGLLLLTNDGGL 130
E L L + + DG + + RV +GRLD +++GL+ LTN G L
Sbjct: 63 EAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDL 122
Query: 131 ARVLELPSTQWLRVYRVRFHGQVDQDKLNLLKKGIVIQGICYGDMQVTLDTQKGSNAWVT 190
+ + Y V + ++ + + G+ I G +K +
Sbjct: 123 VNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTV----TKKCKVKKEAPFVFR 178
Query: 191 VGLREGKNREIKKVFEFFNWKVNRLIRISYGPFQLGTLLAGSTREVSKKILREQLGPHLL 250
+ L +G NR+I+++ E F ++V +L R L + G R+++ L +
Sbjct: 179 ITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIEN 238
Query: 251 EEAQVNLDAPIYSSETLVRDRPNIISEVPDDFTRMKKNSSQKNGLSKQKKLA 302
++V A ++ + + + R N + ++KK
Sbjct: 239 SSSEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR 290