RPSBLAST alignment for GI: 254780406 and conserved domain: pfam00849

>gnl|CDD|144443 pfam00849, PseudoU_synth_2, RNA pseudouridylate synthase. Members of this family are involved in modifying bases in RNA molecules. They carry out the conversion of uracil bases to pseudouridine. This family includes RluD, a pseudouridylate synthase that converts specific uracils to pseudouridine in 23S rRNA. RluA from E. coli converts bases in both rRNA and tRNA. Length = 151

 Score = 50.1 bits (120), Expect = 9e-07
 Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 18/150 (12%)

Query: 75  LWLYHKPIGLVTTHSDPDGRSTVFDNLPSIFS---RVISVGRLDINTEGLLLLTNDGGLA 131
             + +KP G+    +D     ++ + L        R+  V RLD +T GLLLL  DG  A
Sbjct: 1   YIVVNKPAGVPVHPTDLSDLLSLTELLLVAELGKFRLYPVHRLDRDTSGLLLLAKDGEAA 60

Query: 132 RVL--ELPSTQWLRVYRVRFHGQVD-----QDKLNLLKKGIVIQGICYGDMQVTL----- 179
             L    P  +  + Y     G  +     +  +   K  +  +     D +  +     
Sbjct: 61  NKLNKLFPERKVEKEYLALVDGPEEEEGTIKAPIKKDKNKVPRRKKEELDGKKAVTHLRV 120

Query: 180 ---DTQKGSNAWVTVGLREGKNREIKKVFE 206
               ++    + V + L  G+  +I+    
Sbjct: 121 LRSGSKIEDVSLVELELVTGRKHQIRAHLA 150