RPSBLAST alignment for GI: 254780406 and conserved domain: PRK11394
>gnl|CDD|183115 PRK11394, PRK11394, 23S rRNA pseudouridine synthase E; Provisional. Length = 217
Score = 75.2 bits (184), Expect = 3e-14
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 19/187 (10%)
Query: 68 RKAER--TRLWLYHKPIGLVTTHSDPDGRSTVFDNLPSIFSRVISVGRLDINTEGLLLLT 125
RK E TR+ L++KP ++ +D GR T+ + +P V + GRLD ++EGLL+LT
Sbjct: 32 RKPENQPTRVILFNKPYDVLPQFTDEAGRKTLKEFIP--VQGVYAAGRLDRDSEGLLVLT 89
Query: 126 NDGGLARVLELPSTQWLRVYRVRFHGQVDQDKLNLLKKGIVIQ-------GICYGDMQVT 178
N+G L L P + ++Y V+ G QD L L+ G+ + G D
Sbjct: 90 NNGALQARLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAW 149
Query: 179 L--------DTQKGSNAWVTVGLREGKNREIKKVFEFFNWKVNRLIRISYGPFQLGTLLA 230
L + + +W+ + L EG+NR+++++ + RLIR + G + L L
Sbjct: 150 LWPRNPPIRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLDNLAN 209
Query: 231 GSTREVS 237
G RE +
Sbjct: 210 GEWREAT 216