RPSBLAST alignment for GI: 254780406 and conserved domain: cd02554

>gnl|CDD|30011 cd02554, PseudoU_synth_RluF, PseudoU_synth_RluF_like: Pseudouridine synthase, Escherichia coli RluF like. This group is comprised of bacterial proteins similar to Escherichia coli RluF. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. E.coli RluF makes psi2604 in 23S RNA. psi2604 has only been detected in E. coli. It is absent from other eubacteria despite a precursor U at that site and from eukarya and archea which lack a precursor U at that site.. Length = 164
 Score = 76.4 bits (188), Expect = 1e-14
 Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 8/169 (4%)

Query: 76  WLYHKPIGLV-TTHSDPDGRSTVFDNLPSIFSRVISVGRLDINTEGLLLLTNDGGLARVL 134
             Y+KP+G+  T     +     F N P    R+  +GRLD ++EGL+LLTNDG L   +
Sbjct: 3   IAYNKPVGIDCTLERADEDNIIDFVNPPP---RIFPIGRLDKDSEGLILLTNDGDLVNKI 59

Query: 135 ELPSTQWLRVYRVRFHGQVDQDKLNLLKKGIVIQGICYGDMQVTLDTQKGSNAWVTVGLR 194
                   + Y V  +  +  + +  +  G+VI G      +V    +        + L 
Sbjct: 60  LHADNNHEKEYLVTVNKPITDEFIEGMSNGVVILGTVTKPCKVERLAKDK----FRIVLT 115

Query: 195 EGKNREIKKVFEFFNWKVNRLIRISYGPFQLGTLLAGSTREVSKKILRE 243
           +G NR+I+++ E   ++V  L R+     +LG L  G  R ++   L E
Sbjct: 116 QGLNRQIRRMCEALGYRVTDLKRVRIMNIELGDLAPGEWRPLTDAELFE 164