RPSBLAST alignment for GI: 254780406 and conserved domain: cd02555

>gnl|CDD|30012 cd02555, PSSA_1, PSSA_1: Pseudouridine synthase, a subgroup of the RsuA family. This group is comprised of bacterial proteins assigned to the RsuA family of pseudouridine synthases. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. The TruA family is comprised of proteins related to Escherichia coli RsuA. . Length = 177
 Score = 65.3 bits (159), Expect = 3e-11
 Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 12/166 (7%)

Query: 77  LYHKPIGLVTTHSDP--------DGRSTVFDNLPSIFSRVISVGRLDINTEGLLLLTNDG 128
           L HKP G+V+  +              +    L   F+R+  +G LD +  GLL+ + DG
Sbjct: 8   LLHKPAGMVSEQALALLGPGQRSAADRSGRRPLKGHFARLAPIGPLDKDASGLLVFSQDG 67

Query: 129 GLARVLELPSTQWLRVYRVRFHGQVDQDKLNLLKKGIVIQGICYGDMQVTLDTQKGSNAW 188
            + R L   +++  + Y V   G++    L  L  G+   G      +V+      +   
Sbjct: 68  RVLRKLIGDASRLEQEYLVEVRGELTAGGLERLNHGLTYDGRELPPAKVSWQ----NEQR 123

Query: 189 VTVGLREGKNREIKKVFEFFNWKVNRLIRISYGPFQLGTLLAGSTR 234
           +   L+E +  +I+++ E    +V  L RI  G   LG L  G  R
Sbjct: 124 LRFALKEPQPGQIRRMCESVGLEVVALRRIRIGRVSLGKLPLGQWR 169