RPSBLAST alignment for GI: 254780406 and conserved domain: cd02556

>gnl|CDD|30013 cd02556, PseudoU_synth_RluB, PseudoU_synth_RluB: Pseudouridine synthase, Escherichia coli RluB like. This group is comprised of bacterial and eukaryotic proteins similar to E. coli RluB. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. E.coli RluB makes psi2605 in 23S RNA. psi2605 has been detected in eubacteria but, not in eukarya and archea despite the presence of a precursor U at that site.. Length = 167
 Score =  200 bits (509), Expect = 6e-52
 Identities = 83/167 (49%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 74  RLWLYHKPIGLVTTHSDPDGRSTVFDNLPSI-FSRVISVGRLDINTEGLLLLTNDGGLAR 132
           R+ +YHKP GL+ T  DP GR TVFD LP +   R ISVGRLD+NTEGLLL TNDG LA 
Sbjct: 1   RVLIYHKPEGLICTRKDPKGRPTVFDLLPKLGIPRWISVGRLDLNTEGLLLFTNDGELAN 60

Query: 133 VLELPSTQWLRVYRVRFHGQVDQDKLNLLKKGIVIQGICYGDMQVTLDTQKGSNAWVTVG 192
            L  PS +  R Y VR  GQV  ++L  LKKG+ ++    G   + L+  +G N+W  V 
Sbjct: 61  RLMHPSNEIEREYAVRVFGQVTDEQLKSLKKGVELEDGFAGFKSIQLEGGEGKNSWYRVT 120

Query: 193 LREGKNREIKKVFEFFNWKVNRLIRISYGP-FQLGTLLAGSTREVSK 238
           LREG+NRE+++++E F  +V+RLIRI YGP F  G L  G   E+  
Sbjct: 121 LREGRNREVRRLWEAFGLQVSRLIRIRYGPIFLPGNLKRGQWEELPP 167