RPSBLAST alignment of GI: 254780406 and MMDB domain: 1vio_A_58-243

>1vio_A (A:58-243) Ribosomal small subunit pseudouridine synthase A; structural genomics, lyase; 1.59A {Haemophilus influenzae}Length = 186
 Score = 93.5 bits (231), Expect = 3e-20
 Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 3/173 (1%)

Query: 71  ERTRLWLYHKPIGLVTTHSDPDGRSTVFDNLPSIFSRVISVGRLDINTEGLLLLTNDGGL 130
           E  + ++ +KP G V ++ D D  +        +  ++ S GRLD++T GL+LLT+DG  
Sbjct: 3   EEGQYFMLNKPQGCVCSNDDGDYPTIYQFFDYPLAGKLHSAGRLDVDTTGLVLLTDDGQW 62

Query: 131 ARVLELPSTQWLRVYRVRFHGQVDQDKLNLLKKGIVIQGICYGDMQVTLDTQKGSNAWVT 190
           +  +  P     + Y V     V+++      +GI+++G         L+     N  +T
Sbjct: 63  SHRITSPKHHCEKTYLVTLADPVEENYSAACAEGILLRGEKEPTKPAKLEILDDYNVNLT 122

Query: 191 VGLREGKNREIKKVFEFFNWKVNRLIRISYGPFQLGTLLA-GSTREVSKKILR 242
             + EG+  ++K++F     KV  L R   G   L   L  G  R +++  + 
Sbjct: 123 --ISEGRYHQVKRMFAALGNKVVGLHRWKIGDVVLDESLEEGEYRPLTQSEIE 173