RPSBLAST alignment of GI: 254780406 and MMDB domain: 2gml_A_

>2gml_A (A:) Ribosomal large subunit pseudouridine synthase F; RLUF, ribosome, RNA modifying enzyme, isomerase; 2.60A {Escherichia coli}Length = 237

 Score =  100 bits (248), Expect = 4e-22
 Identities = 42/244 (17%), Positives = 86/244 (35%), Gaps = 15/244 (6%)

Query: 60  IEVDGVPLRKAERTRLWLYHKPIGLVTTHSDPDGRSTVFDNLPSIFSRVISVGRLDINTE 119
           +              L   +KP+G+V+  ++   R  + D +     RV  +GRLD +++
Sbjct: 1   MGSSHHHHHHGSDLVLIALNKPVGIVS-TTEDGERDNIVDFVNHSK-RVFPIGRLDKDSQ 58

Query: 120 GLLLLTNDGGLARVLELPSTQWLRVYRVRFHGQVDQDKLNLLKKGIVIQGICYGDMQVTL 179
           GL+ LTN G L   +        + Y V     + ++      +G        G +    
Sbjct: 59  GLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITEEF----IRGXSAGVPILGTVTKKC 114

Query: 180 DTQKGSNAWVTVGLREGKNREIKKVFEFFNWKVNRLIRISYGPFQLGTLLAGSTREVSK- 238
             +K +     + L +G NR+I++  E F ++V +L R       L  +  G  R+++  
Sbjct: 115 KVKKEAPFVFRITLVQGLNRQIRRXCEHFGYEVKKLERTRIXNVSLSGIPLGEWRDLTDD 174

Query: 239 --KILREQLGPHLLEEAQVNLDAPIYSSETLVRDRPNIISEVPDDFTRMKKNSSQKNGLS 296
               L + +     E        P              + +      +  + +S     +
Sbjct: 175 ELIDLFKLIENSSSEVKPKAKAKPKT------AGIKRPVVKXEKTAEKGGRPASNGKRFT 228

Query: 297 KQKK 300
              +
Sbjct: 229 SPGR 232