RPSBLAST alignment of GI: 254780406 and MMDB domain: 3dh3_A_64-290
>3dh3_A (A:64-290) Ribosomal large subunit pseudouridine synthase F; protein-RNA complex, S4 domain, alpha/beta protein, isomerase, RNA-binding, rRNA processing; HET: FHU; 3.00A {Escherichia coli}Length = 227
Score = 101 bits (252), Expect = 1e-22
Identities = 45/234 (19%), Positives = 92/234 (39%), Gaps = 15/234 (6%)
Query: 70 AERTRLWLYHKPIGLVTTHSDPDGRSTVFDNLPSIFSRVISVGRLDINTEGLLLLTNDGG 129
AE L +KP+G+V+ ++ R + D + RV +GRLD +++GL+ LTN G
Sbjct: 1 AEDLVLIALNKPVGIVS-TTEDGERDNIVDFVNHSK-RVFPIGRLDKDSQGLIFLTNHGD 58
Query: 130 LARVLELPSTQWLRVYRVRFHGQVDQDKLNLLKKGIVIQGICYGDMQVTLDTQKGSNAWV 189
L + + Y V + ++ + + G+ I G + +K +
Sbjct: 59 LVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCK----VKKEAPFVF 114
Query: 190 TVGLREGKNREIKKVFEFFNWKVNRLIRISYGPFQLGTLLAGSTREVSK---KILREQLG 246
+ L +G NR+I+++ E F ++V +L R L + G R+++ L + +
Sbjct: 115 RITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIE 174
Query: 247 PHLLEEAQVNLDAPIYSSETLVRDRPNIISEVPDDFTRMKKNSSQKNGLSKQKK 300
E P + ++ + + +S + +
Sbjct: 175 NSSSEVKPKAKAKPKT------AGIKRPVVKMEKTAEKGGRPASNGKRFTSPGR 222