RPSBLAST alignment of GI: 254780406 and protein with PDBid: 2gml
>2gml_A Ribosomal large subunit pseudouridine synthase F; RLUF, ribosome, RNA modifying enzyme, isomerase; 2.60A {Escherichia coli} Length = 237
Score = 125 bits (316), Expect = 1e-29
Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 19/235 (8%)
Query: 77 LYHKPIGLVTTHSDPDGRSTVFDNLPSIFSRVISVGRLDINTEGLLLLTNDGGLARVLEL 136
+KP+G+V+T D + R + D + RV +GRLD +++GL+ LTN G L +
Sbjct: 18 ALNKPVGIVSTTEDGE-RDNIVDFVNH-SKRVFPIGRLDKDSQGLIFLTNHGDLVNKILR 75
Query: 137 PSTQWLRVYRVRFHGQVDQDKLNLLKKGIVIQGICYGDMQVTLDTQKGSNAWVTVGLREG 196
+ Y V + ++ + + G+ I G + +K + + L +G
Sbjct: 76 AGNDHEKEYLVTVDKPITEEFIRGMSAGVPI----LGTVTKKCKVKKEAPFVFRITLVQG 131
Query: 197 KNREIKKVFEFFNWKVNRLIRISYGPFQLGTLLAGSTREVSKKILREQLGPHLLEEAQVN 256
NR+I+++ E F ++V +L R L + G R+++ L + L+E +
Sbjct: 132 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFK--LIENS--- 186
Query: 257 LDAPIYSSETLVRDRPNIISEVPDDFTRMKKNSSQKNG--LSKQKKLATPVHRRN 309
SSE + + + + +++K G S K+ +P ++
Sbjct: 187 ------SSEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKK 235