RPSBLAST alignment of GI: 254780406 and SCOP domain: d1vioa1

Alignment
>d1vioa1 d.265.1.3 (A:58-231) Ribosomal small subunit pseudouridine 516 synthase RsuA {Haemophilus influenzae [TaxId: 727]} Length = 174
 Score =  108 bits (271), Expect = 7e-25
 Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 5/175 (2%)

Query: 71  ERTRLWLYHKPIGLVTTHSDPDGRSTVFDNLPSIFS-RVISVGRLDINTEGLLLLTNDGG 129
           E  + ++ +KP G V ++ D     T++       + ++ S GRLD++T GL+LLT+DG 
Sbjct: 1   EEGQYFMLNKPQGCVCSNDDG-DYPTIYQFFDYPLAGKLHSAGRLDVDTTGLVLLTDDGQ 59

Query: 130 LARVLELPSTQWLRVYRVRFHGQVDQDKLNLLKKGIVIQGICYGDMQVTLDTQKGSNAWV 189
            +  +  P     + Y V     V+++      +GI+++G         L+     N  +
Sbjct: 60  WSHRITSPKHHCEKTYLVTLADPVEENYSAACAEGILLRGEKEPTKPAKLEILDDYNVNL 119

Query: 190 TVGLREGKNREIKKVFEFFNWKVNRLIRISYGPFQLGTLLA-GSTREVSKKILRE 243
           T  + EG+  ++K++F     KV  L R   G   L   L  G  R +++  + +
Sbjct: 120 T--ISEGRYHQVKRMFAALGNKVVGLHRWKIGDVVLDESLEEGEYRPLTQSEIEK 172

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Pseudouridine synthase
superfamily: Pseudouridine synthase
family: Pseudouridine synthase RsuA/RluD
domain: Ribosomal small subunit pseudouridine 516 synthase RsuA
species: Haemophilus influenzae [TaxId: 727]