HHsearch alignment for GI: 254780409 and conserved domain: COG1040

Probab=98.44  E-value=1.7e-06  Score=63.47  Aligned_cols=124  Identities=28%  Similarity=0.372  Sum_probs=68.2

Q ss_pred             CCEEEEECCCCHHHHHH-----CCCCCEECCHHHHHHHHHHHHCC----CCCEEEEECCCCHH----------HHHHHHH
Q ss_conf             77269951583577652-----58862000103777787653058----55518851665635----------7899999
Q gi|254780409|r  118 ADRVIMLDLHAGQVQGF-----FDIPTDNLYALPILERDIKERND----ISNLMVVSPDVGGV----------VRARALA  178 (310)
Q Consensus       118 ~d~vit~DlH~~~~~~~-----F~ip~~nl~~~~~l~~~l~~~~~----~~~~vVVaPD~G~~----------~ra~~~a  178 (310)
T Consensus        65 ~~~~~~~~~Y~~~l~~~i~~~Kf~~---~~~l~~~la~~l~~~~~~~~~~~~~iVpVPls~~r~~~RGFNQ~~~la~~l~  141 (225)
T COG1040          65 FERLRSLGSYNGPLRELISQLKFQG---DLDLAKLLARLLAKALDDFLEKPDLIVPVPLSPSRLLERGFNQSELLARALA  141 (225)
T ss_pred             CCCEEEEEEECHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHH
T ss_conf             3025888873199999999865267---1778999999999986511346675997369877887468789999999987


Q ss_pred             HHCCCCEEEEECCCCCCCC-----------C-EEECCCCCCCC-CEEEEECHHHCCHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf             9709979998326767632-----------1-00002454557-428995213203366888989875268752178720
Q gi|254780409|r  179 KRLGCLLAIVDKRREHPGK-----------I-EVMNIIGKVEG-KDCILIDDIVDTGGTLCGAADALYEQGALSVTAYIT  245 (310)
Q Consensus       179 ~~L~~~~~~~~K~R~~~~~-----------v-~~~~~~gdV~g-r~vIIVDDii~TGgTi~~aa~~Lk~~GA~~V~~~~T  245 (310)
T Consensus       142 ~~~~~~~-~l~r~k~~~~q~~l~~~~rr~nl~~aF~~~~~~~~~~~vlLvDDV~TTGaTl~~~~~~L~~~Ga~~v~~~~l  220 (225)
T COG1040         142 RRLGKPI-ALRRVKDTSPQQGLKALERRRNLKGAFRLKKGIEEPKNVLLVDDVYTTGATLKEAAKLLREAGAKRVFVLTL  220 (225)
T ss_pred             HHHCCCH-HHEECCCCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf             7647642-110000673100455589998460563147876767728999400666799999999999759916999999