HHsearch alignment for GI: 254780409 and conserved domain: PRK04117

Probab=98.17  E-value=9.5e-05  Score=51.86  Aligned_cols=132  Identities=20%  Similarity=0.163  Sum_probs=80.2

Q ss_pred             CCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCCCCCEEEEECHHHCC-HH---HHHHHHHHHHHCCCCCEEEE
Q ss_conf             563578999999709979998326767632100002454557428995213203-36---68889898752687521787
Q gi|254780409|r  168 VGGVVRARALAKRLGCLLAIVDKRREHPGKIEVMNIIGKVEGKDCILIDDIVDT-GG---TLCGAADALYEQGALSVTAY  243 (310)
Q Consensus       168 ~G~~~ra~~~a~~L~~~~~~~~K~R~~~~~v~~~~~~gdV~gr~vIIVDDii~T-Gg---Ti~~aa~~Lk~~GA~~V~~~  243 (310)
T Consensus        10 ss~~~La~~ia~~Lg~~l~~~~~~~FpDGE~~v-~i~~~vrg~dV~ivqs~~~p~nd~lmELll~~~a~r~agA~~It~V   88 (309)
T PRK04117         10 SANPEFAKEVSKYLGLPLSKATIKRFSDGEINV-QISESVRGKDVFIIQPTCAPANDNLMELLIMTDALRRSSANSITAV   88 (309)
T ss_pred             CCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEE-EECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             998999999999978983221889889998888-6688778998899917999824889999999999987489738896


Q ss_pred             EECCCCC-------------HHHH-HHHHHCCCCEEEECCCCCCCHHHHCCCCEEEEECHHHHHHHHHHHH
Q ss_conf             2055557-------------1689-8886369989998178878434740798599811799999999871
Q gi|254780409|r  244 ITHGVLS-------------SSSI-ERIEKSKMKELVITDSIQPTDLVKSSAKIRILTIAQLMGEAINRTF  300 (310)
Q Consensus       244 ~THgifs-------------~~a~-e~l~~s~i~~iv~TnTi~~~~~~~~~~ki~visva~llA~aI~~i~  300 (310)
T Consensus        89 iPY~~YsRQDr~~~~ge~isak~vA~lL~~~G~d~vitvDlH~~~i~~fF~ip~~~l~~~~~~~~~i~~~~  159 (309)
T PRK04117         89 VPYFGYARQDRKAAPRVPITAKLVANLMQAAGIDRVVTMDLHAGQIQGFFDIPVDNLYGSIVFRDYIKSKN  159 (309)
T ss_pred             ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCEEECCHHHHHHHHHHC
T ss_conf             03550021444569998701899998886427765899617868874036897330345387789999618