HHsearch alignment for GI: 254780409 and conserved domain: PRK05259

Probab=98.03  E-value=9.5e-05  Score=51.89  Aligned_cols=129  Identities=17%  Similarity=0.143  Sum_probs=60.7

Q ss_pred             CCHHHHHHHHHHHCCCEEEEEEEECCCCEEEEE-ECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHC
Q ss_conf             999999999999589104448998699707888-5678689708998597888046799999999999861720011310
Q gi|254780409|r    8 SNRNLAQEICDYLHTSLGKASVTYFSDREVFVE-IGENVRGEDVFIVQSTSCPANDYLMELLIMIDAVRRSSARRITGVI   86 (310)
Q Consensus         8 ~~~~La~~ia~~lg~~l~~~~~~~F~dGE~~v~-i~~~vrg~dV~ivqs~~~~~nd~lmeLl~~~~a~k~~~A~~it~Vi   86 (310)
T Consensus       169 G~~~ra~~~a~~l~~~~~~~~K~R~~~~~~~~~~~~gdV~Gk~~IIvDDiIdT-GgTl~---~aa~~Lk~~GA~~V~~~~  244 (310)
T PRK05259        169 GGVVRARALAKRLDAPLAIVDKRRERPGESEVMNVIGDVSGRDCILIDDIVDS-GGTLC---NAAEALLANGANSVTAYI  244 (310)
T ss_pred             HHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHC-HHHHH---HHHHHHHHCCCCEEEEEE
T ss_conf             69999999999819967899986068995433454566231248951734416-88999---999999877998699999


Q ss_pred             CCCCHHHCCCCCCCCCCHHHHHHHHHHEECCCCEEEEECCCCHHHHHHCC-CCCEECCHHHHHHHHHHHH
Q ss_conf             23301103431125652147776520000267726995158357765258-8620001037777876530
Q gi|254780409|r   87 PYFGYCRQDRKPSPRTPISAKLVANLITQAGADRVIMLDLHAGQVQGFFD-IPTDNLYALPILERDIKER  155 (310)
Q Consensus        87 PY~~YaRqDr~~~~~e~isak~~a~ll~~~G~d~vit~DlH~~~~~~~F~-ip~~nl~~~~~l~~~l~~~  155 (310)
T Consensus       245 THgv-------------fs~~A~~-ri~~s~i~~vvvTdTi~~~-~~~~~~~kl~vlsva~llAeaI~r~  299 (310)
T PRK05259        245 THGV-------------LSGGAVA-RIASSKLKELVITDSIQPT-EAVNDAPNIRVLSIAPLIGEAIRRT  299 (310)
T ss_pred             ECCC-------------CCCHHHH-HHHCCCCCEEEEECCCCCC-HHHHCCCCCEEEEHHHHHHHHHHHH
T ss_conf             7853-------------6856999-9862899789993897888-4570589939998299999999998