HHsearch alignment for GI: 254780409 and conserved domain: PRK09177

Probab=97.81  E-value=9.3e-05  Score=51.92  Aligned_cols=87  Identities=26%  Similarity=0.413  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCE-EEE-ECCCCC--CCCCEEECCCCCCCCCEEEEECHHHC
Q ss_conf             37777876530585551885166563578999999709979-998-326767--63210000245455742899521320
Q gi|254780409|r  145 LPILERDIKERNDISNLMVVSPDVGGVVRARALAKRLGCLL-AIV-DKRREH--PGKIEVMNIIGKVEGKDCILIDDIVD  220 (310)
Q Consensus       145 ~~~l~~~l~~~~~~~~~vVVaPD~G~~~ra~~~a~~L~~~~-~~~-~K~R~~--~~~v~~~~~~gdV~gr~vIIVDDii~  220 (310)
T Consensus        19 ~~~LA~kI~~~~--~~d~IV~IaRGGliPA~~ls~~L~i~~i~~i~v~~Y~~~~~~~~~v~~-~~~~~gkkVLIVDDI~D   95 (156)
T PRK09177         19 ARALAWRLLPAG--QWKGIIAVTRGGLVPAAILARELGIRLVDTVCISSYDHDNQGELKVLK-AAEGDGEGFLVVDDLVD   95 (156)
T ss_pred             HHHHHHHHHHCC--CCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCCCEEEC-CCCCCCCEEEEEECCCC
T ss_conf             999999998508--986699991478315999999859840579999961566556542541-67777862899953436


Q ss_pred             CHHHHHHHHHHHHH
Q ss_conf             33668889898752
Q gi|254780409|r  221 TGGTLCGAADALYE  234 (310)
Q Consensus       221 TGgTi~~aa~~Lk~  234 (310)
T Consensus        96 TG~Tl~~vk~~~~~  109 (156)
T PRK09177         96 TGGTARAVREMYPK  109 (156)
T ss_pred             CCHHHHHHHHHCCC
T ss_conf             63789999986788