HHsearch results for GI: 254780409 and protein with PDBid: 3dah_A
>3dah_A Ribose-phosphate pyrophosphokinase; seattle structural genomics center for infectious disease, ssgcid, cytoplasm, magnesium; HET: AMP; 2.30A {Burkholderia pseudomallei 1710B}
Probab=100.00 E-value=0 Score=717.17 Aligned_cols=309 Identities=56% Similarity=0.878 Sum_probs=302.2
Q ss_pred CEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 98997689999999999995891044489986997078885678689708998597888046799999999999861720
Q gi|254780409|r 1 MKIFAGNSNRNLAQEICDYLHTSLGKASVTYFSDREVFVEIGENVRGEDVFIVQSTSCPANDYLMELLIMIDAVRRSSAR 80 (310)
Q Consensus 1 m~i~~g~~~~~La~~ia~~lg~~l~~~~~~~F~dGE~~v~i~~~vrg~dV~ivqs~~~~~nd~lmeLl~~~~a~k~~~A~ 80 (310)
|+||+|++|++||++||+.||++++++++++|||||.++|++++|||+|||||||+++|+||++||||++++|||++||+
T Consensus 8 m~i~~gss~~~La~~ia~~lg~~l~~~~~~~FpDGE~~vri~~~vrg~dV~iiqs~~~~~nd~lmeLll~~~a~r~~gA~ 87 (319)
T 3dah_A 8 LMVFTGNANPALAQEVVKILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFVLQSTCAPTNDNLMELMIMVDALKRASAG 87 (319)
T ss_dssp EEEEECSSCHHHHHHHHHHHTSCCCCEEEEECTTSCEEEEECSCCBTCEEEEECCCCSSHHHHHHHHHHHHHHHHHTTBS
T ss_pred EEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 89997898799999999986994263488988999788877897679808999379968637899999999999874977
Q ss_pred HHHHHCCCCCHHHCCCCCCCCC-CHHHHHHHHHHEECCCCEEEEECCCCHHHHHHCCCCCEECCHHHHHHHHHHHHCCCC
Q ss_conf 0113102330110343112565-214777652000026772699515835776525886200010377778765305855
Q gi|254780409|r 81 RITGVIPYFGYCRQDRKPSPRT-PISAKLVANLITQAGADRVIMLDLHAGQVQGFFDIPTDNLYALPILERDIKERNDIS 159 (310)
Q Consensus 81 ~it~ViPY~~YaRqDr~~~~~e-~isak~~a~ll~~~G~d~vit~DlH~~~~~~~F~ip~~nl~~~~~l~~~l~~~~~~~ 159 (310)
+||+|+|||||+||||++++|+ |+|++++|+||+++|+|+|+|+|+|++|+|+||++|++|+++.+.+++|+.+. +++
T Consensus 88 ~itlViPYl~YsRQDr~~~~g~~~isa~~va~ll~~~g~d~vitvDlH~~~i~~~f~~pv~~l~~~~~~~~~~~~~-~~~ 166 (319)
T 3dah_A 88 RITAAIPYFGYARQDRRPRSARVAISAKVVANMLEIAGVERIITMDLHADQIQGFFDIPVDNIYATPILLGDLRKQ-NYP 166 (319)
T ss_dssp EEEEEESSCTTTTCCSCCTTCCCCCHHHHHHHHHHHHTCCEEEEESCSCGGGGGGCSSCEEEECCHHHHHHHHHTT-CCT
T ss_pred CEEEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCHHHHCCHHHHHHHHHH-CCC
T ss_conf 2588714662322032346774306799998444005885599957784878416699703331257888999974-798
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCCCCCEEEEECHHHCCHHHHHHHHHHHHHCCCCC
Q ss_conf 51885166563578999999709979998326767632100002454557428995213203366888989875268752
Q gi|254780409|r 160 NLMVVSPDVGGVVRARALAKRLGCLLAIVDKRREHPGKIEVMNIIGKVEGKDCILIDDIVDTGGTLCGAADALYEQGALS 239 (310)
Q Consensus 160 ~~vVVaPD~G~~~ra~~~a~~L~~~~~~~~K~R~~~~~v~~~~~~gdV~gr~vIIVDDii~TGgTi~~aa~~Lk~~GA~~ 239 (310)
+++|||||.|+.+||+.+|+.||+++++++|+|+++++++++.++|||+||+||||||||||||||+++++.|+++||++
T Consensus 167 ~~vvvsPD~Ga~kra~~~A~~l~~~~~~~~K~R~~~~~v~~~~~~gdv~gr~vIIVDDii~TGgTi~~aa~~Lk~~GA~~ 246 (319)
T 3dah_A 167 DLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVAEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQ 246 (319)
T ss_dssp TEEEECCSSTTHHHHHHHHHHTTCEEEC--------------------CCSEEEEEEEEESSCHHHHHHHHHHHHTTCSC
T ss_pred CCEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEECCHHCCCHHHHHHHHHHHHCCCCE
T ss_conf 73898568856999999898649988999999189993677314434379878973734406201999999999779986
Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHCCCCEEEEECHHHHHHHHHHHHCCCCCCHHCC
Q ss_conf 17872055557168988863699899981788784347407985998117999999998718887313009
Q gi|254780409|r 240 VTAYITHGVLSSSSIERIEKSKMKELVITDSIQPTDLVKSSAKIRILTIAQLMGEAINRTFEERSISSLFD 310 (310)
Q Consensus 240 V~~~~THgifs~~a~e~l~~s~i~~iv~TnTi~~~~~~~~~~ki~visva~llA~aI~~i~~~~Svs~l~~ 310 (310)
|+++||||+|+++|+|+|.++++++|++|||||++++.+.++|++++||||+||++|+++|+|+|||+||+
T Consensus 247 V~~~~THglfs~~a~e~l~~s~i~~iv~TdTip~~~~~~~~~k~~visva~liA~aI~~i~~~~Svs~lf~ 317 (319)
T 3dah_A 247 VFAYATHPVLSGGAADRIAASALDELVVTDTIPLSAESLACPKIRALSSAGLLAETFSRIRRGDSVMSLFA 317 (319)
T ss_dssp EEEEEEEECCCTTHHHHHHTSSCSEEEEESSSCCCHHHHHCTTEEEECCHHHHHHHHHHHHHTCCSTTC--
T ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHCC
T ss_conf 48997466448079999861899989987897787456458980998839999999999867996799628