HHsearch alignment for GI: 254780410 and conserved domain: COG2263

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis].
Probab=95.41  E-value=0.14  Score=30.86  Aligned_cols=84  Identities=14%  Similarity=0.265  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCHHCC-CC
Q ss_conf             99999999983888762141007864689888799997418564301210236369789999986411102310110-43
Q gi|254780410|r   64 AIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGDKINWY-TS  142 (362)
Q Consensus        64 a~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~~v~w~-~~  142 (362)
T Consensus        31 Aa~il~~a~~~g~l~g~~V~DlG~GTG~La~ga~---------~lGa~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~d  101 (198)
T COG2263          31 AAYILWVAYLRGDLEGKTVLDLGAGTGILAIGAA---------LLGASRVLAVDIDPEALEIARANAEELLGDVEFVVAD  101 (198)
T ss_pred             HHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHH---------HCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf             9999999987388478888882788478899998---------6297179999369899999998888608846999821


Q ss_pred             HHHCCCCCEEEEEE
Q ss_conf             44445695699981
Q gi|254780410|r  143 LADVPLGFTFLVAN  156 (362)
Q Consensus       143 l~~~~~~~~iiiaN  156 (362)
T Consensus       102 v~~~~~~~dtvimN  115 (198)
T COG2263         102 VSDFRGKFDTVIMN  115 (198)
T ss_pred             HHHCCCCCCEEEEC
T ss_conf             01147766669978