HHsearch alignment for GI: 254780410 and conserved domain: COG2518
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones].
Probab=93.97 E-value=0.41 Score=27.67 Aligned_cols=106 Identities=22% Similarity=0.361 Sum_probs=62.3
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHCCCCC---------CCCC-CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 9999999818980499999987108987---------8646-89888888886457671179999999999999998388
Q gi|254780410|r 7 RKIVNLIKKNGQMTVDQYFALCVADPEF---------GYYS-TCNPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGF 76 (362)
Q Consensus 7 ~~i~~~I~~~G~i~f~~fM~~aLy~p~~---------GYY~-~~~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~ 76 (362)
T Consensus 4 ~~l~~~lr~~~i~~-~~v~~A~~~vPRe~FVp~~~~~~AY~d~~lpi~-~gqtis~P~~v-------A~----m~~~L~~ 70 (209)
T COG2518 4 RMLVERLRTEGITD-ERVLKAFLAVPRELFVPAAYKHLAYEDRALPIG-CGQTISAPHMV-------AR----MLQLLEL 70 (209)
T ss_pred HHHHHHHHHCCCCC-HHHHHHHHHCCHHHCCCCHHHCCCCCCCCCCCC-CCCEECCCHHH-------HH----HHHHHCC
T ss_conf 78999998718775-999999985898750690454256468764478-99350574799-------99----9997489
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCCC
Q ss_conf 87621410078646898887999974185643012102363697899999864111023
Q gi|254780410|r 77 PSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYGD 135 (362)
Q Consensus 77 p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~~ 135 (362)
T Consensus 71 ~~g~~VLEIGtGsGY~aAvla~l~----------~~V~siEr~~~L~~~A~~~L~~lg~ 119 (209)
T COG2518 71 KPGDRVLEIGTGSGYQAAVLARLV----------GRVVSIERIEELAEQARRNLETLGY 119 (209)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH----------CEEEEEEECHHHHHHHHHHHHHCCC
T ss_conf 999868887778309999999974----------8499999719999999999997698