HHsearch alignment for GI: 254780410 and conserved domain: PRK00274
>PRK00274 ksgA dimethyladenosine transferase; Reviewed.
Probab=97.12 E-value=0.0035 Score=41.81 Aligned_cols=70 Identities=21% Similarity=0.366 Sum_probs=46.2
Q ss_pred CCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEE
Q ss_conf 86468988888888645767117999999999999999838887621410078646898887999974185643012102
Q gi|254780410|r 35 GYYSTCNPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIY 114 (362)
Q Consensus 35 GYY~~~~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ 114 (362)
T Consensus 10 ~~~~-kK~lGQ--nFL~d~~ii--------~kIv~~---~~~~~~d~VlEIGpG~G~LT~~Ll~~----------~~~v~ 65 (267)
T PRK00274 10 GHRA-KKSLGQ--NFLIDENII--------DKIVRA---ADLQPGDRVLEIGPGLGALTEPLLER----------AAKVT 65 (267)
T ss_pred CCCC-CCCCCC--CCCCCHHHH--------HHHHHH---CCCCCCCEEEEECCCCCHHHHHHHHH----------CCCEE
T ss_conf 9998-877782--214898999--------999996---08999990799638888899999962----------68058
Q ss_pred EEECCHHHHHHHHH
Q ss_conf 36369789999986
Q gi|254780410|r 115 MVETSERLTLIQKK 128 (362)
Q Consensus 115 ivE~s~~l~~~Q~~ 128 (362)
T Consensus 66 aiEiD~~l~~~L~~ 79 (267)
T PRK00274 66 AIEIDRDLAPILRE 79 (267)
T ss_pred EEECCHHHHHHHHH
T ss_conf 86368899999850