HHsearch alignment for GI: 254780410 and conserved domain: pfam08123
>pfam08123 DOT1 Histone methylation protein DOT1. The DOT1 domain regulates gene expression by methylating histone H3. H3 methylation by DOT1 has been shown to be required for the DNA damage checkpoint in yeast.
Probab=93.52 E-value=0.25 Score=29.13 Aligned_cols=67 Identities=21% Similarity=0.319 Sum_probs=47.0
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCC-EEEEECCH---HHHHHHHHHHH
Q ss_conf 179999999999999998388876214100786468988879999741856430121-02363697---89999986411
Q gi|254780410|r 56 SQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLS-IYMVETSE---RLTLIQKKQLA 131 (362)
Q Consensus 56 s~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~-~~ivE~s~---~l~~~Q~~~l~ 131 (362)
T Consensus 20 ~~vYGEllp~fis~ii~~~~l~~~dvF~DLGSGVGnvv~QaAl~---------tgc~~s~GiEi~~~~a~~A~~~~~~~~ 90 (205)
T pfam08123 20 NEVYGELLPEFLSDVLDKCNLGPQDVFVDLGSGVGNCVLQAALE---------FGCKLSFGCEIMDNASNLAELQDEEFK 90 (205)
T ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH---------HCCCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 75511358899999999839897688998588832999999987---------096538888865668999999999999