HHsearch alignment for GI: 254780410 and conserved domain: smart00650
>smart00650 rADc Ribosomal RNA adenine dimethylases.
Probab=96.71 E-value=0.0083 Score=39.27 Aligned_cols=51 Identities=20% Similarity=0.406 Sum_probs=37.7
Q ss_pred HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHH
Q ss_conf 9838887621410078646898887999974185643012102363697899999864111
Q gi|254780410|r 72 EQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLAS 132 (362)
Q Consensus 72 ~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~ 132 (362)
T Consensus 7 ~~a~~~~~d~VlEIGPG~G~LT~~Ll~~----------~~~v~aiE~D~~l~~~L~~~~~~ 57 (169)
T smart00650 7 RAANLRPGDTVLEIGPGKGALTEELLER----------AARVTAIEIDPRLAPRLREKFAA 57 (169)
T ss_pred HHHCCCCCCEEEEECCCHHHHHHHHHHH----------CCCCCEEECCHHHHHHHHHHHCC
T ss_conf 8638999497999689702999999973----------16353163788999999986410