HHsearch results for GI: 254780410 and protein with PDBid: 1nt2_A

>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, coiled coil, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus dsm 4304} SCOP: c.66.1.3
Probab=91.76  E-value=0.25  Score=27.61  Aligned_cols=67  Identities=18%  Similarity=0.196  Sum_probs=41.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             76711799999999999999983888762141007864689888799997418564301210236369789999986411
Q gi|254780410|r   52 APEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLA  131 (362)
Q Consensus        52 sp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~  131 (362)
                      .|.-|.+     |..++.- ..+.....-.|+++|+|+|+++..+.+..    +    ...++-||.|+...+.-+++..
T Consensus        37 ~p~rskl-----aa~i~~~-~~l~ikpg~~VLDlG~GtG~~~~~la~~~----~----~g~V~avD~s~~~i~~a~~~a~  102 (210)
T 1nt2_A           37 VPWRSKL-----AAMILKG-HRLKLRGDERVLYLGAASGTTVSHLADIV----D----EGIIYAVEYSAKPFEKLLELVR  102 (210)
T ss_dssp             CGGGCHH-----HHHHHTS-CCCCCCSSCEEEEETCTTSHHHHHHHHHT----T----TSEEEEECCCHHHHHHHHHHHH
T ss_pred             CCCHHHH-----HHHHHCC-CCCCCCCCCEEEEECCCCCHHHHHHHHHC----C----CCEEEEEECCHHHHHHHHHHHH
T ss_conf             8625389-----9998687-76688998999995688888899999743----6----9859999699999999997786


Q ss_pred             H
Q ss_conf             1
Q gi|254780410|r  132 S  132 (362)
Q Consensus       132 ~  132 (362)
                      .
T Consensus       103 ~  103 (210)
T 1nt2_A          103 E  103 (210)
T ss_dssp             H
T ss_pred             H
T ss_conf             4