HHsearch results for GI: 254780410 and protein with PDBid: 1qam_A
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=97.06 E-value=0.0019 Score=42.09 Aligned_cols=75 Identities=15% Similarity=0.248 Sum_probs=49.8
Q ss_pred CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHH
Q ss_conf 88888886457671179999999999999998388876214100786468988879999741856430121023636978
Q gi|254780410|r 42 PFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSER 121 (362)
Q Consensus 42 ~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~ 121 (362)
++|. .|.+.+.+ . ..+.+..+....-.|+|+|||.|.|..-+++. ..+++.||+.+.
T Consensus 7 k~GQ--nFL~d~~i--------~---~~Iv~~~~~~~~d~VlEIGpG~G~LT~~L~~~----------~~~v~avEiD~~ 63 (244)
T 1qam_A 7 KHSQ--NFITSKHN--------I---DKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR----------CNFVTAIEIDHK 63 (244)
T ss_dssp ---C--CBCCCHHH--------H---HHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH----------SSEEEEECSCHH
T ss_pred CCCC--CCCCCHHH--------H---HHHHHHCCCCCCCEEEEECCCCCHHHHHHHHC----------CCCEEEEEECHH
T ss_conf 8888--41479999--------9---99999567899997999738871999999855----------583069985301
Q ss_pred HHHHHHHHHHHCCCCHHCC
Q ss_conf 9999986411102310110
Q gi|254780410|r 122 LTLIQKKQLASYGDKINWY 140 (362)
Q Consensus 122 l~~~Q~~~l~~~~~~v~w~ 140 (362)
+.+.-+++..+. .++..+
T Consensus 64 l~~~L~~~~~~~-~n~~ii 81 (244)
T 1qam_A 64 LCKTTENKLVDH-DNFQVL 81 (244)
T ss_dssp HHHHHHHHTTTC-CSEEEE
T ss_pred HHHHHHHHHCCC-CCEEEE
T ss_conf 779999741447-765773