HHsearch results for GI: 254780410 and protein with PDBid: 2yvl_A

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural genomics, NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus VF5}
Probab=94.02  E-value=0.18  Score=28.66  Aligned_cols=101  Identities=14%  Similarity=0.231  Sum_probs=61.3

Q ss_pred             CCCCCCCCCCCCCCCC-CCCEEECCCC-CHHHHHHHHH------------HHHHHHHHCCCCCCCEEEEECCCCHHHHHH
Q ss_conf             0898786468988888-8886457671-1799999999------------999999983888762141007864689888
Q gi|254780410|r   30 ADPEFGYYSTCNPFGA-VGDFVTAPEI-SQIFGEMLAI------------FLICAWEQHGFPSCVRLVELGPGRGIMMLD   95 (362)
Q Consensus        30 y~p~~GYY~~~~~~G~-~GDF~Tsp~i-s~~Fg~~ia~------------~~~~~~~~~~~p~~~~ivE~GaG~G~La~d   95 (362)
                      ++-.+|++.-.+.+|+ .|+-+++-.+ -|...+.+..            =+..+...++....-.|+|+|.|+|.|+..
T Consensus        29 ~~t~~G~~~h~~iig~~~G~~v~~~~~~~p~~~d~~~~~~~r~~qiiypkD~~~Ii~~l~i~pG~rVLEiGtGsG~lt~~  108 (248)
T 2yvl_A           29 LSVKKSVLKFDEVIGKPEGVKINGFEVYRPTLEEIILLGFERKTQIIYPKDSFYIALKLNLNKEKRVLEFGTGSGALLAV  108 (248)
T ss_dssp             EEETTEEEEGGGTTTCCTTEEETTEEEECCCHHHHHHHTSCCSSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHH
T ss_pred             EEECCEEEEHHHHCCCCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
T ss_conf             98688698889946999986898899987980899845488887406789999999982899999799737431199999


Q ss_pred             HHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC--CCHHCC
Q ss_conf             799997418564301210236369789999986411102--310110
Q gi|254780410|r   96 ILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG--DKINWY  140 (362)
Q Consensus        96 iL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~--~~v~w~  140 (362)
                      +.+.          ..+.+-+|.++...+.-++++..++  ++|.++
T Consensus       109 La~~----------~g~v~t~e~~e~~~~~A~~n~~~~g~~~nv~~~  145 (248)
T 2yvl_A          109 LSEV----------AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFF  145 (248)
T ss_dssp             HHHH----------SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEE
T ss_pred             HHHC----------CCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             9860----------787999828899999999989970057705999