HHsearch results for GI: 254780410 and protein with PDBid: 2yvl_A
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural genomics, NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus VF5}
Probab=94.02 E-value=0.18 Score=28.66 Aligned_cols=101 Identities=14% Similarity=0.231 Sum_probs=61.3
Q ss_pred CCCCCCCCCCCCCCCC-CCCEEECCCC-CHHHHHHHHH------------HHHHHHHHCCCCCCCEEEEECCCCHHHHHH
Q ss_conf 0898786468988888-8886457671-1799999999------------999999983888762141007864689888
Q gi|254780410|r 30 ADPEFGYYSTCNPFGA-VGDFVTAPEI-SQIFGEMLAI------------FLICAWEQHGFPSCVRLVELGPGRGIMMLD 95 (362)
Q Consensus 30 y~p~~GYY~~~~~~G~-~GDF~Tsp~i-s~~Fg~~ia~------------~~~~~~~~~~~p~~~~ivE~GaG~G~La~d 95 (362)
++-.+|++.-.+.+|+ .|+-+++-.+ -|...+.+.. =+..+...++....-.|+|+|.|+|.|+..
T Consensus 29 ~~t~~G~~~h~~iig~~~G~~v~~~~~~~p~~~d~~~~~~~r~~qiiypkD~~~Ii~~l~i~pG~rVLEiGtGsG~lt~~ 108 (248)
T 2yvl_A 29 LSVKKSVLKFDEVIGKPEGVKINGFEVYRPTLEEIILLGFERKTQIIYPKDSFYIALKLNLNKEKRVLEFGTGSGALLAV 108 (248)
T ss_dssp EEETTEEEEGGGTTTCCTTEEETTEEEECCCHHHHHHHTSCCSSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHH
T ss_pred EEECCEEEEHHHHCCCCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
T ss_conf 98688698889946999986898899987980899845488887406789999999982899999799737431199999
Q ss_pred HHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC--CCHHCC
Q ss_conf 799997418564301210236369789999986411102--310110
Q gi|254780410|r 96 ILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG--DKINWY 140 (362)
Q Consensus 96 iL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~--~~v~w~ 140 (362)
+.+. ..+.+-+|.++...+.-++++..++ ++|.++
T Consensus 109 La~~----------~g~v~t~e~~e~~~~~A~~n~~~~g~~~nv~~~ 145 (248)
T 2yvl_A 109 LSEV----------AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFF 145 (248)
T ss_dssp HHHH----------SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEE
T ss_pred HHHC----------CCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 9860----------787999828899999999989970057705999