HHsearch results for GI: 254780410 and protein with PDBid: 3gdh_A
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=94.96 E-value=0.16 Score=29.02 Aligned_cols=68 Identities=18% Similarity=0.202 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHCC--CCHH
Q ss_conf 99999999999983888762141007864689888799997418564301210236369789999986411102--3101
Q gi|254780410|r 61 EMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETSERLTLIQKKQLASYG--DKIN 138 (362)
Q Consensus 61 ~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s~~l~~~Q~~~l~~~~--~~v~ 138 (362)
+.+|.++...+..... .-.|+++|+|.|.++.-+.+. ..+++.||.|+...+.-+++....+ ++|.
T Consensus 63 e~ia~~ia~~~~~~~~--~~~vlD~gcG~G~~~~~la~~----------~~~v~~iD~s~~~i~~a~~n~~~~~~~~~i~ 130 (241)
T 3gdh_A 63 EKIAEHIAGRVSQSFK--CDVVVDAFCGVGGNTIQFALT----------GMRVIAIDIDPVKIALARNNAEVYGIADKIE 130 (241)
T ss_dssp HHHHHHHHHHHHHHSC--CSEEEETTCTTSHHHHHHHHT----------TCEEEEEESCHHHHHHHHHHHHHTTCGGGEE
T ss_pred HHHHHHHHHHHHHCCC--CCEEEECCCCCCHHHHHHHHC----------CCEEEEEECCHHHHHHHHHHHHHCCCCCCEE
T ss_conf 9999999998650289--998999378736889999967----------9989999897788899999999849987439
Q ss_pred CC
Q ss_conf 10
Q gi|254780410|r 139 WY 140 (362)
Q Consensus 139 w~ 140 (362)
++
T Consensus 131 ~~ 132 (241)
T 3gdh_A 131 FI 132 (241)
T ss_dssp EE
T ss_pred EE
T ss_conf 99