HHsearch results for GI: 254780410 and protein with PDBid: 3gru_A
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assembly S-adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=97.05 E-value=0.0026 Score=41.23 Aligned_cols=70 Identities=16% Similarity=0.259 Sum_probs=47.0
Q ss_pred CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEECC
Q ss_conf 98888888864576711799999999999999983888762141007864689888799997418564301210236369
Q gi|254780410|r 40 CNPFGAVGDFVTAPEISQIFGEMLAIFLICAWEQHGFPSCVRLVELGPGRGIMMLDILRVICKLKPDFFSVLSIYMVETS 119 (362)
Q Consensus 40 ~~~~G~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~p~~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~l~~~ivE~s 119 (362)
+..+|. .|.+.+.+ ...+++ ..+....-.|+|+|||.|.|...+++. .-+++.||+.
T Consensus 25 kK~lGQ--NFL~d~~i--------~~kIv~---~~~~~~~d~VlEIGpG~G~LT~~Ll~~----------~~~v~aiEiD 81 (295)
T 3gru_A 25 KKKLGQ--CFLIDKNF--------VNKAVE---SANLTKDDVVLEIGLGKGILTEELAKN----------AKKVYVIEID 81 (295)
T ss_dssp -----C--CEECCHHH--------HHHHHH---HTTCCTTCEEEEECCTTSHHHHHHHHH----------SSEEEEEESC
T ss_pred CCCCCC--CCCCCHHH--------HHHHHH---HCCCCCCCEEEEECCCHHHHHHHHHHC----------CCCEEEEEEC
T ss_conf 887782--30289999--------999999---638999995999799746999999816----------8966999988
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 7899999864111
Q gi|254780410|r 120 ERLTLIQKKQLAS 132 (362)
Q Consensus 120 ~~l~~~Q~~~l~~ 132 (362)
+.|.+.-+++...
T Consensus 82 ~~l~~~L~~~~~~ 94 (295)
T 3gru_A 82 KSLEPYANKLKEL 94 (295)
T ss_dssp GGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 7999999976764