HHsearch alignment for GI: 254780412 and conserved domain: COG2960

>COG2960 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=99.82  E-value=9.1e-20  Score=146.26  Aligned_cols=82  Identities=28%  Similarity=0.425  Sum_probs=79.5

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99750069999999998668887799999999999999999987398569999999999999999999999999999999
Q gi|254780412|r    1 MSFRSNQFFQQASRLASCASDAFKDISKEAESFAQIKIQRTLNSMGVVRAEEIENVKRTTSHLREEITAIGKRLEKIEQQ   80 (94)
Q Consensus         1 m~~~~n~~~ddla~~~~~a~~~~~~~~~Eie~~~r~~~e~~l~kldLVtREEFdv~~~~l~k~R~~~e~Le~rl~~LE~k   80 (94)
T Consensus         9 ~m~~~~~~e~~~~ql~e~~a~~~~~~~~evE~~~r~~~q~~lnkLDlVsREEFdvq~qvl~rtR~kl~~Leari~~LEar   88 (103)
T COG2960           9 TMIGPNRFEDIAAQLSEDAAGAAQEVRAEVEKAFRAQLQRQLNKLDLVSREEFDVQRQVLLRTREKLAALEARIEELEAR   88 (103)
T ss_pred             HCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             04777789999999998731000103799999999999988776022439999999999999999999999999999987


Q ss_pred             HH
Q ss_conf             99
Q gi|254780412|r   81 LA   82 (94)
Q Consensus        81 l~   82 (94)
T Consensus        89 l~   90 (103)
T COG2960          89 LA   90 (103)
T ss_pred             HC
T ss_conf             42