HHsearch alignment for GI: 254780412 and conserved domain: COG2960
>COG2960 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=99.82 E-value=9.1e-20 Score=146.26 Aligned_cols=82 Identities=28% Similarity=0.425 Sum_probs=79.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99750069999999998668887799999999999999999987398569999999999999999999999999999999
Q gi|254780412|r 1 MSFRSNQFFQQASRLASCASDAFKDISKEAESFAQIKIQRTLNSMGVVRAEEIENVKRTTSHLREEITAIGKRLEKIEQQ 80 (94)
Q Consensus 1 m~~~~n~~~ddla~~~~~a~~~~~~~~~Eie~~~r~~~e~~l~kldLVtREEFdv~~~~l~k~R~~~e~Le~rl~~LE~k 80 (94)
T Consensus 9 ~m~~~~~~e~~~~ql~e~~a~~~~~~~~evE~~~r~~~q~~lnkLDlVsREEFdvq~qvl~rtR~kl~~Leari~~LEar 88 (103)
T COG2960 9 TMIGPNRFEDIAAQLSEDAAGAAQEVRAEVEKAFRAQLQRQLNKLDLVSREEFDVQRQVLLRTREKLAALEARIEELEAR 88 (103)
T ss_pred HCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 04777789999999998731000103799999999999988776022439999999999999999999999999999987
Q ss_pred HH
Q ss_conf 99
Q gi|254780412|r 81 LA 82 (94)
Q Consensus 81 l~ 82 (94)
T Consensus 89 l~ 90 (103)
T COG2960 89 LA 90 (103)
T ss_pred HC
T ss_conf 42