HHsearch alignment for GI: 254780412 and conserved domain: TIGR01834
>TIGR01834 PHA_synth_III_E poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit; InterPro: IPR010123 This entry represents the PhaE subunit of the heterodimeric class (class III) of polymerase for poly(R)-hydroxyalkanoic acids (PHAs), carbon and energy storage polymers of many bacteria. The most common PHA is polyhydroxybutyrate but about 150 different constituent hydroxyalkanoic acids (HAs) have been identified in various species..
Probab=93.32 E-value=0.45 Score=27.83 Aligned_cols=65 Identities=17% Similarity=0.334 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999998668887799999999999999999987398569999999999999999999999999999999
Q gi|254780412|r 12 ASRLASCASDAFKDISKEAESFAQIKIQRTLNSMGVVRAEEIENVKRTTSHLREEITAIGKRLEKIEQQ 80 (94)
Q Consensus 12 la~~~~~a~~~~~~~~~Eie~~~r~~~e~~l~kldLVtREEFdv~~~~l~k~R~~~e~Le~rl~~LE~k 80 (94)
T Consensus 266 ~~~v~G~liNA~m~l----k~~~q~~~~~~~~~LnlPtRsEl~~~h~~i~~l~r~~~~L~~~l~~~~~~ 330 (332)
T TIGR01834 266 YAKVHGKLINALMRL----KKRQQEVVEELLKALNLPTRSELDEAHQRIQELRREVKELKKRLADLEKK 330 (332)
T ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 678998879899999----99999999999865389976899999999999999999999875114222