HHsearch alignment for GI: 254780412 and conserved domain: TIGR01837
>TIGR01837 PHA_granule_1 poly(hydroxyalkanoate) granule-associated protein; InterPro: IPR008769 Polyhydroxyalkanoates (PHAs) are storage polyesters synthesised by various bacteria as intracellular carbon and energy reserve material. PHAs are accumulated as water-insoluble inclusions within the cells. This family consists of the phasins PhaF and PhaI which act as a transcriptional regulator of PHA biosynthesis genes. PhaF has been proposed to repress expression of the phaC1 gene and the phaIF operon..
Probab=96.19 E-value=0.073 Score=32.84 Aligned_cols=63 Identities=14% Similarity=0.295 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999986688877999999999999999999873985699999999999999999999999999999
Q gi|254780412|r 9 FQQASRLASCASDAFKDISKEAESFAQIKIQRTLNSMGVVRAEEIENVKRTTSHLREEITAIGKRLEKIE 78 (94)
Q Consensus 9 ~ddla~~~~~a~~~~~~~~~Eie~~~r~~~e~~l~kldLVtREEFdv~~~~l~k~R~~~e~Le~rl~~LE 78 (94)
T Consensus 57 ~~~~~~~~~~~~d~~~~~w~~l~~~FD~R~~~~L~rL~IPs~~e~eaL-------~~k~e~L~~~~e~l~ 119 (121)
T TIGR01837 57 IEEVKTKLEQVRDKVQRNWDKLEKAFDERVEQALNRLNIPSKEEVEAL-------RAKVEQLKEQVEELR 119 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH-------HHHHHHHHHHHHHHH
T ss_conf 999998888779999888988999999999999985789987769999-------999999999999884