HHsearch alignment for GI: 254780412 and conserved domain: pfam05597
>pfam05597 Phasin Poly(hydroxyalcanoate) granule associated protein (phasin). Polyhydroxyalkanoates (PHAs) are storage polyesters synthesized by various bacteria as intracellular carbon and energy reserve material. PHAs are accumulated as water-insoluble inclusions within the cells. This family consists of the phasins PhaF and PhaI which act as a transcriptional regulator of PHA biosynthesis genes. PhaF has been proposed to repress expression of the phaC1 gene and the phaIF operon.
Probab=96.97 E-value=0.0081 Score=38.89 Aligned_cols=50 Identities=20% Similarity=0.346 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 779999999999999999998739856999999999999999999999999999999
Q gi|254780412|r 23 FKDISKEAESFAQIKIQRTLNSMGVVRAEEIENVKRTTSHLREEITAIGKRLEKIEQ 79 (94)
Q Consensus 23 ~~~~~~Eie~~~r~~~e~~l~kldLVtREEFdv~~~~l~k~R~~~e~Le~rl~~LE~ 79 (94)
T Consensus 81 a~~~wdklE~~fe~rV~~aL~rLGips~~di~~L-------~~rId~L~a~l~~L~~ 130 (132)
T pfam05597 81 AEGQWDKLEQAFDERVAKALNRLGVPSRKEVEAL-------SARIDELTAQLEELAE 130 (132)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH-------HHHHHHHHHHHHHHHC
T ss_conf 8765888999999999999985699989999999-------9999999999999753