HHsearch alignment for GI: 254780412 and conserved domain: pfam09712
>pfam09712 PHA_synth_III_E Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E). This entry represents the PhaE subunit of the heterodimeric class (class III) of polymerase for poly(R)-hydroxyalkanoic acids (PHAs), carbon and energy storage polymers of many bacteria. The most common PHA is polyhydroxybutyrate but about 150 different constituent hydroxyalkanoic acids (HAs) have been identified in various species.
Probab=92.84 E-value=0.92 Score=25.89 Aligned_cols=58 Identities=21% Similarity=0.331 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999998668887799999999999999999987398569999999999999999999999
Q gi|254780412|r 10 QQASRLASCASDAFKDISKEAESFAQIKIQRTLNSMGVVRAEEIENVKRTTSHLREEITAIG 71 (94)
Q Consensus 10 ddla~~~~~a~~~~~~~~~Eie~~~r~~~e~~l~kldLVtREEFdv~~~~l~k~R~~~e~Le 71 (94)
T Consensus 235 ee~~k~~g~~~nA~m~~r~~----~q~~~e~~l~~l~lPTrseld~~~kri~eLrre~r~L~ 292 (293)
T pfam09712 235 EEYAQIHGRLSNAQMRLRRA----LQQVVDELLGSLGLPTRSELDTAQRRLQELRRENRALA 292 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 89999999999999999999----99999999863899827889999999999999998752