Query         gi|254780412|ref|YP_003064825.1| hypothetical protein CLIBASIA_01485 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 94
No_of_seqs    106 out of 392
Neff          5.2 
Searched_HMMs 23785
Date          Mon May 30 10:05:08 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780412.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2pnv_A Small conductance calci  91.9    0.33 1.4E-05   27.3   5.8   35   55-89      6-40  (43)
  2 1go4_E MAD1 (mitotic arrest de  86.3     1.4   6E-05   23.3   5.7   39   45-83      6-44  (100)
  3 1dip_A Delta-sleep-inducing pe  84.2    0.71   3E-05   25.2   3.3   39   45-90      2-47  (78)
  4 3gw6_A Endo-N-acetylneuraminid  82.5    0.65 2.7E-05   25.5   2.5   31   48-80    245-275 (275)
  5 3ljm_A Coil Ser L9C; de novo d  78.8     2.5  0.0001   21.8   4.5   22   64-85      7-28  (31)
  6 1u0i_A IAAL-E3; coiled-coil, d  73.9     1.8 7.5E-05   22.7   2.7   20   66-85      1-20  (26)
  7 3iyn_Q Protein IX, PIX, hexon-  71.0     5.8 0.00024   19.4   5.2   31   59-89     99-129 (140)
  8 1g6u_A Domain swapped dimer; d  69.8     3.9 0.00016   20.5   3.6   30   48-84     17-46  (48)
  9 1aq5_A Matrilin-1, CMP, cartil  65.8     7.4 0.00031   18.8   4.5   23   59-81     24-46  (47)
 10 3hrn_A Transient receptor pote  60.8     9.1 0.00038   18.2   6.8   39   48-86      3-41  (64)
 11 3efg_A Protein SLYX homolog; x  51.6     5.7 0.00024   19.5   1.8   29   56-84     33-61  (78)
 12 2ic6_A Nucleocapsid protein; h  44.3      17  0.0007   16.5   5.8   35   54-88     41-75  (78)
 13 3ghg_A Fibrinogen alpha chain;  44.1      17 0.00071   16.5   7.9   29   63-91    129-157 (562)
 14 3ioz_B T-cell surface glycopro  40.6      11 0.00047   17.6   1.9   19   39-57     21-39  (45)
 15 2k48_A Nucleoprotein; viral pr  36.0      22 0.00094   15.7   5.3   64   20-86     34-103 (107)
 16 2ic9_A Nucleocapsid protein; h  34.5      24   0.001   15.6   5.3   38   49-86     36-73  (96)
 17 2er8_A Regulatory protein Leu3  33.5      18 0.00077   16.3   2.1   23   64-86     48-70  (72)
 18 2fzt_A Hypothetical protein TM  33.3      25   0.001   15.5   5.5   39   49-87     29-73  (79)
 19 3fdl_A Apoptosis regulator BCL  32.1      26  0.0011   15.3   5.5   45   18-62     34-78  (158)
 20 3he4_A Synzip6; heterodimeric   30.6      28  0.0012   15.2   6.2   34   56-89     22-55  (56)
 21 3ci9_A Heat shock factor-bindi  28.3      30  0.0013   14.9   2.5   17   65-81     31-47  (48)
 22 1m1j_C Fibrinogen gamma chain;  28.2      30  0.0013   14.9   6.7   41   50-90     76-116 (409)
 23 1zme_C Proline utilization tra  27.4      31  0.0013   14.8   4.2   25   65-89     44-68  (70)
 24 2wuj_A Septum site-determining  27.3      31  0.0013   14.8   3.4   17   64-80     40-56  (57)
 25 3kin_B Kinesin heavy chain; mo  26.1      33  0.0014   14.7   5.5   32   53-84     84-115 (117)
 26 2ve7_C Kinetochore protein NUF  25.6      34  0.0014   14.6   2.4   34   53-86    143-176 (250)
 27 1uuj_A Platelet-activating fac  25.5      25  0.0011   15.4   1.6   30   59-88     52-81  (88)
 28 3bas_A Myosin heavy chain, str  25.4      34  0.0014   14.6   6.5   28   62-89     60-87  (89)
 29 2jmh_A BLO T 5, mite allergen   23.8      36  0.0015   14.4   4.2   44   35-78     72-117 (119)
 30 3mq7_A Bone marrow stromal ant  23.1      38  0.0016   14.3   5.9   27   62-88     68-94  (121)
 31 3lss_A Seryl-tRNA synthetase;   22.4      39  0.0016   14.2   5.9   39   48-86    101-139 (484)
 32 2nov_A DNA topoisomerase 4 sub  21.7      40  0.0017   14.1   2.7   41   49-89    412-454 (496)
 33 3deu_A Transcriptional regulat  21.4      41  0.0017   14.1   6.1   47   23-72    118-164 (166)
 34 1r48_A Proline/betaine transpo  21.2      41  0.0017   14.1   3.3   21   64-84      7-27  (33)
 35 1ca9_A TRAF2, protein (TNF rec  21.0      41  0.0017   14.0   3.3   35   52-86      4-38  (192)

No 1  
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=91.86  E-value=0.33  Score=27.34  Aligned_cols=35  Identities=26%  Similarity=0.232  Sum_probs=29.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999999999650
Q gi|254780412|r   55 NVKRTTSHLREEITAIGKRLEKIEQQLADLELFIN   89 (94)
Q Consensus        55 v~~~~l~k~R~~~e~Le~rl~~LE~kl~~le~~~~   89 (94)
                      +.-+++.-..++.+.||+||..||.||..+-+.+.
T Consensus         6 vMYdlvSeL~~rsEdlEkri~~LEtkLd~l~~slq   40 (43)
T 2pnv_A            6 IMYDMISDLNERSEDFEKRIVTLETKLETLIGSIH   40 (43)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999998768999999999989999998874


No 2  
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=86.34  E-value=1.4  Score=23.29  Aligned_cols=39  Identities=18%  Similarity=0.223  Sum_probs=33.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             398569999999999999999999999999999999999
Q gi|254780412|r   45 MGVVRAEEIENVKRTTSHLREEITAIGKRLEKIEQQLAD   83 (94)
Q Consensus        45 ldLVtREEFdv~~~~l~k~R~~~e~Le~rl~~LE~kl~~   83 (94)
                      .-++|+|+++.++.-+...+.+.+.|+.+.+.||-+|..
T Consensus         6 s~~~s~E~v~~Lr~kie~Le~E~~~L~~~k~~LE~~lE~   44 (100)
T 1go4_E            6 SFLFSREEADTLRLKVEELEGERSRLEEEKRMLEAQLER   44 (100)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             153569999999999999999999999999999999999


No 3  
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=84.22  E-value=0.71  Score=25.22  Aligned_cols=39  Identities=26%  Similarity=0.371  Sum_probs=29.4

Q ss_pred             CCCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             3985-------699999999999999999999999999999999999996500
Q gi|254780412|r   45 MGVV-------RAEEIENVKRTTSHLREEITAIGKRLEKIEQQLADLELFINQ   90 (94)
Q Consensus        45 ldLV-------tREEFdv~~~~l~k~R~~~e~Le~rl~~LE~kl~~le~~~~~   90 (94)
                      ||||       -|||.|+++       ++|.+|+.|+..||..=+-|+.+..+
T Consensus         2 MDLVKsHLm~AVREEVevLk-------e~I~eL~~~~~~Le~EN~~Lk~~~~p   47 (78)
T 1dip_A            2 MDLVKNHLMYAVREEVEILK-------EQIRELVEKNSQLERENTLLKTLASP   47 (78)
T ss_dssp             CCSTTTGGGGTCTTSCHHHH-------HHHHHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             CHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf             16999999999999999999-------99999999999999999999960899


No 4  
>3gw6_A Endo-N-acetylneuraminidase; chaperone, glycosidase, hydrolase; HET: TAM; 2.60A {Enterobacteria phage K1F}
Probab=82.48  E-value=0.65  Score=25.48  Aligned_cols=31  Identities=29%  Similarity=0.383  Sum_probs=19.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             569999999999999999999999999999999
Q gi|254780412|r   48 VRAEEIENVKRTTSHLREEITAIGKRLEKIEQQ   80 (94)
Q Consensus        48 VtREEFdv~~~~l~k~R~~~e~Le~rl~~LE~k   80 (94)
                      |..+||-.+  +.+-.+.++++|++||++||.|
T Consensus       245 iry~el~~l--~~A~qe~~i~~LeaRi~aLE~k  275 (275)
T 3gw6_A          245 VRPDGIFFA--EAAYQRRKLERIEARLSALEQK  275 (275)
T ss_dssp             ECHHHHHHH--HHHHHHHHHHHHHHHHHTTTC-
T ss_pred             CCHHHHHHH--HHHHHHHHHHHHHHHHHHHCCC
T ss_conf             879999999--9999999999999999986289


No 5  
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 1coi_A
Probab=78.84  E-value=2.5  Score=21.79  Aligned_cols=22  Identities=27%  Similarity=0.539  Sum_probs=14.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999999999999
Q gi|254780412|r   64 REEITAIGKRLEKIEQQLADLE   85 (94)
Q Consensus        64 R~~~e~Le~rl~~LE~kl~~le   85 (94)
                      ..+..+||.++.+||+++..+|
T Consensus         7 ekk~aalesk~qalekk~eale   28 (31)
T 3ljm_A            7 EKKCAALESKLQALEKKLEALE   28 (31)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999999987


No 6  
>1u0i_A IAAL-E3; coiled-coil, de novo protein; NMR {Synthetic} SCOP: k.6.1.1
Probab=73.95  E-value=1.8  Score=22.68  Aligned_cols=20  Identities=40%  Similarity=0.679  Sum_probs=15.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999
Q gi|254780412|r   66 EITAIGKRLEKIEQQLADLE   85 (94)
Q Consensus        66 ~~e~Le~rl~~LE~kl~~le   85 (94)
                      ++.+||+.|++||+.++.+|
T Consensus         1 eiaalekeiaalekeiaale   20 (26)
T 1u0i_A            1 EIAALEKEIAALEKEIAALE   20 (26)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHH
T ss_conf             91789999999999999998


No 7  
>3iyn_Q Protein IX, PIX, hexon-associated protein; cryoem, 3D reconstruction, FULL-ATOM model interaction network, capsid protein, hexon protein; 3.60A {Human adenovirus 5}
Probab=70.98  E-value=5.8  Score=19.45  Aligned_cols=31  Identities=23%  Similarity=0.381  Sum_probs=21.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999999999999999999650
Q gi|254780412|r   59 TTSHLREEITAIGKRLEKIEQQLADLELFIN   89 (94)
Q Consensus        59 ~l~k~R~~~e~Le~rl~~LE~kl~~le~~~~   89 (94)
                      .+.-.+.++++|..||.+|+.+++++...+.
T Consensus        99 ~l~~l~a~L~aLt~~L~~L~qqv~el~~~~~  129 (140)
T 3iyn_Q           99 KLTALLAQLDSLTRELNVVSQQLLDLRQQVS  129 (140)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999999999999999974


No 8  
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=69.79  E-value=3.9  Score=20.55  Aligned_cols=30  Identities=27%  Similarity=0.510  Sum_probs=17.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             5699999999999999999999999999999999999
Q gi|254780412|r   48 VRAEEIENVKRTTSHLREEITAIGKRLEKIEQQLADL   84 (94)
Q Consensus        48 VtREEFdv~~~~l~k~R~~~e~Le~rl~~LE~kl~~l   84 (94)
                      .+-||.-++       ..++.+||+++++|..+|..+
T Consensus        17 fspeelaal-------eselqalekklaalksklqal   46 (48)
T 1g6u_A           17 FSPEELAAL-------ESELQALEKKLAALKSKLQAL   46 (48)
T ss_dssp             CSHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999988-------999999999999999999875


No 9  
>1aq5_A Matrilin-1, CMP, cartilage matrix protein; coiled-coil, heptad repeat, interchain disulfide bonds, oligomerization domain, trimer; NMR {Gallus gallus} SCOP: h.1.6.1
Probab=65.76  E-value=7.4  Score=18.77  Aligned_cols=23  Identities=26%  Similarity=0.596  Sum_probs=13.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999
Q gi|254780412|r   59 TTSHLREEITAIGKRLEKIEQQL   81 (94)
Q Consensus        59 ~l~k~R~~~e~Le~rl~~LE~kl   81 (94)
                      .+...-.+++++-+|++.||+++
T Consensus        24 ~lq~LtqkLe~~tkRLe~LEnri   46 (47)
T 1aq5_A           24 LINTLQQKLEAVAKRIEALENKI   46 (47)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99999999999999999998603


No 10 
>3hrn_A Transient receptor potential (Trp) channel subfamily P member 2 (TRPP2); coiled coil, helix bundle, trimer, calcium, disease mutation, glycoprotein; 1.90A {Homo sapiens} PDB: 3hro_A
Probab=60.78  E-value=9.1  Score=18.20  Aligned_cols=39  Identities=21%  Similarity=0.306  Sum_probs=27.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             569999999999999999999999999999999999999
Q gi|254780412|r   48 VRAEEIENVKRTTSHLREEITAIGKRLEKIEQQLADLEL   86 (94)
Q Consensus        48 VtREEFdv~~~~l~k~R~~~e~Le~rl~~LE~kl~~le~   86 (94)
                      |+.|||.++..-..+.-.-+-..-.+|+++-.||...|-
T Consensus         3 Vs~eEf~vL~rRVdr~EhSIgSIvSKIDav~~KLEamer   41 (64)
T 3hrn_A            3 VSYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEIMER   41 (64)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             669999999999999998782899999999999998899


No 11 
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structural genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=51.62  E-value=5.7  Score=19.47  Aligned_cols=29  Identities=7%  Similarity=0.107  Sum_probs=13.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999999
Q gi|254780412|r   56 VKRTTSHLREEITAIGKRLEKIEQQLADL   84 (94)
Q Consensus        56 ~~~~l~k~R~~~e~Le~rl~~LE~kl~~l   84 (94)
                      +-.++.+-..+++.|..++..|..++..+
T Consensus        33 Ln~~v~~Qq~~I~~L~~ql~~L~~rl~~~   61 (78)
T 3efg_A           33 LSEALADARLTGARNAELIRHLLEDLGKV   61 (78)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999999973


No 12 
>2ic6_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 1.15A {Sin nombre virus}
Probab=44.28  E-value=17  Score=16.53  Aligned_cols=35  Identities=26%  Similarity=0.339  Sum_probs=27.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999999999965
Q gi|254780412|r   54 ENVKRTTSHLREEITAIGKRLEKIEQQLADLELFI   88 (94)
Q Consensus        54 dv~~~~l~k~R~~~e~Le~rl~~LE~kl~~le~~~   88 (94)
                      |+-+..+.+-+..+..|+.+|..|+-++++.+.+.
T Consensus        41 ~~nK~~le~rk~~v~~LeeqL~kLk~q~tD~~enk   75 (78)
T 2ic6_A           41 DVNKSTLQSRRAAVSALETKLGELKRELADLIAAQ   75 (78)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             76489999999999999999999999988799842


No 13 
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, alternative splicing, amyloid, amyloidosis, blood coagulation, coiled coil; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=44.12  E-value=17  Score=16.52  Aligned_cols=29  Identities=21%  Similarity=0.198  Sum_probs=16.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             99999999999999999999999965002
Q gi|254780412|r   63 LREEITAIGKRLEKIEQQLADLELFINQK   91 (94)
Q Consensus        63 ~R~~~e~Le~rl~~LE~kl~~le~~~~~k   91 (94)
                      ....+..|+.+|..+..++.+||-.++-+
T Consensus       129 ~~~~~~~l~~~~~~~~~~~~~le~~~~~~  157 (562)
T 3ghg_A          129 KVQHIQLLQKNVRAQLVDMKRLEVDIDIK  157 (562)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999999999


No 14 
>3ioz_B T-cell surface glycoprotein CD3 zeta chain; protein-protein complex, cell membrane, lipoprotein, membrane, myristate, viral immunoevasion; 3.70A {Homo sapiens}
Probab=40.60  E-value=11  Score=17.63  Aligned_cols=19  Identities=21%  Similarity=0.352  Sum_probs=15.8

Q ss_pred             HHHHHHCCCCCHHHHHHHH
Q ss_conf             9999873985699999999
Q gi|254780412|r   39 QRTLNSMGVVRAEEIENVK   57 (94)
Q Consensus        39 e~~l~kldLVtREEFdv~~   57 (94)
                      ....+.+++-.||||||+-
T Consensus        21 nqlYNELn~grREEYdvLd   39 (45)
T 3ioz_B           21 NQLYNELNLGRREEYDVLD   39 (45)
T ss_pred             HHHHHHHCCCCHHHHHHHH
T ss_conf             6787774225047888886


No 15 
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=36.01  E-value=22  Score=15.72  Aligned_cols=64  Identities=19%  Similarity=0.320  Sum_probs=41.0

Q ss_pred             HHHHHHHHHHHHH------HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8887799999999------999999999987398569999999999999999999999999999999999999
Q gi|254780412|r   20 SDAFKDISKEAES------FAQIKIQRTLNSMGVVRAEEIENVKRTTSHLREEITAIGKRLEKIEQQLADLEL   86 (94)
Q Consensus        20 ~~~~~~~~~Eie~------~~r~~~e~~l~kldLVtREEFdv~~~~l~k~R~~~e~Le~rl~~LE~kl~~le~   86 (94)
                      ++.+..+.+|+-.      ..|+++..+=.-   |-++-=|+-+..+.+-|..+.+|+.+|+.|..+++++=+
T Consensus        34 Ms~leelQ~Eit~hEqQLviArQKLkDAeka---~E~DPDdvNK~tlq~Rq~~VsaLe~KiaelKRqmAd~V~  103 (107)
T 2k48_A           34 MSTLQELQENITAHEQQLVTARQKLKDAEKA---VEVDPDDVNKSTLQNRRAAVSTLETKLGELKRQLADLVA  103 (107)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             7459999999999999999999999999998---752926660899999999999999999999999999987


No 16 
>2ic9_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 2.00A {Sin nombre virus}
Probab=34.47  E-value=24  Score=15.57  Aligned_cols=38  Identities=24%  Similarity=0.328  Sum_probs=31.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             69999999999999999999999999999999999999
Q gi|254780412|r   49 RAEEIENVKRTTSHLREEITAIGKRLEKIEQQLADLEL   86 (94)
Q Consensus        49 tREEFdv~~~~l~k~R~~~e~Le~rl~~LE~kl~~le~   86 (94)
                      -++.=|+-+..+.+-+..+.+|+.+|+.|..+++++=+
T Consensus        36 E~DpDevNK~~~~~R~~~Vs~lq~KiaelKr~lAd~v~   73 (96)
T 2ic9_A           36 ELDPDDVNKSTLQSRRAAVSALETKLGELKRELADLIA   73 (96)
T ss_dssp             HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             63936662899999999999999999999999999997


No 17 
>2er8_A Regulatory protein Leu3; Zn(2)Cys(6) binuclear cluster motif, transcription activator/DNA complex; 2.85A {Saccharomyces cerevisiae} PDB: 2ere_A 2erg_A
Probab=33.51  E-value=18  Score=16.28  Aligned_cols=23  Identities=30%  Similarity=0.478  Sum_probs=17.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999
Q gi|254780412|r   64 REEITAIGKRLEKIEQQLADLEL   86 (94)
Q Consensus        64 R~~~e~Le~rl~~LE~kl~~le~   86 (94)
                      +..+..|+.+|+.|+.+|+.+..
T Consensus        48 ~~~~~~l~~~~~~l~~~l~~l~~   70 (72)
T 2er8_A           48 RARNEAIEKRFKELTRTLTNLTS   70 (72)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCC--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             66899999999999999998723


No 18 
>2fzt_A Hypothetical protein TM0693; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.05A {Thermotoga maritima MSB8} SCOP: a.46.3.1 PDB: 2g42_A
Probab=33.33  E-value=25  Score=15.45  Aligned_cols=39  Identities=15%  Similarity=0.242  Sum_probs=33.1

Q ss_pred             CHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             69999------9999999999999999999999999999999996
Q gi|254780412|r   49 RAEEI------ENVKRTTSHLREEITAIGKRLEKIEQQLADLELF   87 (94)
Q Consensus        49 tREEF------dv~~~~l~k~R~~~e~Le~rl~~LE~kl~~le~~   87 (94)
                      .||+|      +.+...+.|-|.+++-++.+.++|-..+..+..-
T Consensus        29 ~Re~ll~~Lp~~~L~ei~EkD~~R~e~i~~~~~~L~~~~~~ir~~   73 (79)
T 2fzt_A           29 KRKELMEGLPKDKLSEILEKDRKRLEIIEKRKTALFQEINVIREA   73 (79)
T ss_dssp             HHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999998677398999999976899999999999999999878889


No 19 
>3fdl_A Apoptosis regulator BCL-X; helical bundle, peptide-protein complex, apoptosis, alternative splicing, membrane, mitochondrion, nucleus, transmembrane; 1.78A {Homo sapiens} PDB: 3fdm_A 3inq_A* 3io8_A 2p1l_A 2o2m_A* 2o2n_A*
Probab=32.07  E-value=26  Score=15.32  Aligned_cols=45  Identities=7%  Similarity=0.128  Sum_probs=36.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             668887799999999999999999987398569999999999999
Q gi|254780412|r   18 CASDAFKDISKEAESFAQIKIQRTLNSMGVVRAEEIENVKRTTSH   62 (94)
Q Consensus        18 ~a~~~~~~~~~Eie~~~r~~~e~~l~kldLVtREEFdv~~~~l~k   62 (94)
                      ....++..+.+|++...+...+.....+++..+..+++...|+..
T Consensus        34 ~v~~~Lr~vg~ele~~~~~~f~~~~~~L~it~~~~~~~f~~Va~e   78 (158)
T 3fdl_A           34 AVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNE   78 (158)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHHHHTCCCCTTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf             899999999999999989999999998088975189999999999


No 20 
>3he4_A Synzip6; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=30.56  E-value=28  Score=15.16  Aligned_cols=34  Identities=18%  Similarity=0.377  Sum_probs=25.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999999999999999999999650
Q gi|254780412|r   56 VKRTTSHLREEITAIGKRLEKIEQQLADLELFIN   89 (94)
Q Consensus        56 ~~~~l~k~R~~~e~Le~rl~~LE~kl~~le~~~~   89 (94)
                      +.-+..+....+..||+-|+.||+-++.+|-.+.
T Consensus        22 lenivarlendnanlekdianlekdianlerdva   55 (56)
T 3he4_A           22 LENIVARLENDNANLEKDIANLEKDIANLERDVA   55 (56)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999999965530088889889989998887622


No 21 
>3ci9_A Heat shock factor-binding protein 1; triple helix, nucleus, transcription; 1.80A {Homo sapiens}
Probab=28.33  E-value=30  Score=14.93  Aligned_cols=17  Identities=18%  Similarity=0.558  Sum_probs=8.6

Q ss_pred             HHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999
Q gi|254780412|r   65 EEITAIGKRLEKIEQQL   81 (94)
Q Consensus        65 ~~~e~Le~rl~~LE~kl   81 (94)
                      .|++..-.||+.||+-+
T Consensus        31 ~riDdM~~rIDdLEksi   47 (48)
T 3ci9_A           31 GRIDDMSSRIDDLEKNI   47 (48)
T ss_dssp             HHHHHHHHHHHTTC---
T ss_pred             HHHHHHHHHHHHHHHHC
T ss_conf             99999883688897643


No 22 
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=28.23  E-value=30  Score=14.91  Aligned_cols=41  Identities=17%  Similarity=0.216  Sum_probs=21.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999999999999996500
Q gi|254780412|r   50 AEEIENVKRTTSHLREEITAIGKRLEKIEQQLADLELFINQ   90 (94)
Q Consensus        50 REEFdv~~~~l~k~R~~~e~Le~rl~~LE~kl~~le~~~~~   90 (94)
                      .+..+.+........+++..++..|..++.+|.+++-.+..
T Consensus        76 qq~~e~l~q~~~el~eei~~lk~~I~~~e~qI~eLq~~l~~  116 (409)
T 1m1j_C           76 PQSIEQLTQKSKKIIEEIIRYENTILAHENTIQQLTDMHIM  116 (409)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999999999899999999987


No 23 
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=27.36  E-value=31  Score=14.81  Aligned_cols=25  Identities=12%  Similarity=0.197  Sum_probs=17.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999999999999650
Q gi|254780412|r   65 EEITAIGKRLEKIEQQLADLELFIN   89 (94)
Q Consensus        65 ~~~e~Le~rl~~LE~kl~~le~~~~   89 (94)
                      ..+..|+.+++.|+..+..++..+.
T Consensus        44 ~~~~~l~~~~~~l~~~~~~l~~~l~   68 (70)
T 1zme_C           44 KYLQQLQKDLNDKTEENNRLKALLL   68 (70)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999999999986


No 24 
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=27.30  E-value=31  Score=14.81  Aligned_cols=17  Identities=6%  Similarity=0.329  Sum_probs=7.5

Q ss_pred             HHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999
Q gi|254780412|r   64 REEITAIGKRLEKIEQQ   80 (94)
Q Consensus        64 R~~~e~Le~rl~~LE~k   80 (94)
                      ..++..|+.+|..|+.+
T Consensus        40 ~~e~~~L~~~~~~l~~~   56 (57)
T 2wuj_A           40 LRKKTELEAKVNELDER   56 (57)
T ss_dssp             HHHHHHHHHHHHC----
T ss_pred             HHHHHHHHHHHHHHHHC
T ss_conf             99999999999999854


No 25 
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=26.10  E-value=33  Score=14.67  Aligned_cols=32  Identities=19%  Similarity=0.258  Sum_probs=24.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999999999
Q gi|254780412|r   53 IENVKRTTSHLREEITAIGKRLEKIEQQLADL   84 (94)
Q Consensus        53 Fdv~~~~l~k~R~~~e~Le~rl~~LE~kl~~l   84 (94)
                      .+.....+.+..++++.|+.++..|+.++..+
T Consensus        84 ~~~~~~~~~~~~~~~~~l~~~i~~L~~el~~l  115 (117)
T 3kin_B           84 AEEWKKKYEKEKEKNKALKSVIQHLEVELNRW  115 (117)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999999999986


No 26 
>2ve7_C Kinetochore protein NUF2, kinetochore protein SPC24; HEC1, NDC80, nucleus, mitosis, centromere, cell cycle, microtubule, coiled-coil, coiled coil; 2.88A {Homo sapiens}
Probab=25.57  E-value=34  Score=14.61  Aligned_cols=34  Identities=9%  Similarity=0.055  Sum_probs=13.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999999999999999999999999
Q gi|254780412|r   53 IENVKRTTSHLREEITAIGKRLEKIEQQLADLEL   86 (94)
Q Consensus        53 Fdv~~~~l~k~R~~~e~Le~rl~~LE~kl~~le~   86 (94)
                      |+-.......+-++...|..++.+++++|.+++.
T Consensus       143 ~~e~~~e~~~~~ek~~~l~~~~~Ele~kIe~lk~  176 (250)
T 2ve7_C          143 YMEFLWQYKSSADKMQQLNAAHQEALMKLERLEK  176 (250)
T ss_dssp             HHHHHHHTTHHHHHHHHHHHHHHHHHHSCC----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999888999999999999999978999998


No 27 
>1uuj_A Platelet-activating factor acetylhydrolase IB alpha subunit; mitosis, neurogenesis, cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=25.45  E-value=25  Score=15.40  Aligned_cols=30  Identities=10%  Similarity=0.158  Sum_probs=17.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999999999999999999965
Q gi|254780412|r   59 TTSHLREEITAIGKRLEKIEQQLADLELFI   88 (94)
Q Consensus        59 ~l~k~R~~~e~Le~rl~~LE~kl~~le~~~   88 (94)
                      .|.|==.-+--|.++|-.||++++.++.-+
T Consensus        52 LLEKKWTSVvRLQKKImdLE~~~~~lq~El   81 (88)
T 1uuj_A           52 LLEKKWTSVIRLQKKVMELESKLNEAKEEF   81 (88)
T ss_dssp             HHHHHHTCHHHHHHHHHHHHHHHHHTTC--
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             003789989999999999999999999998


No 28 
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=25.42  E-value=34  Score=14.59  Aligned_cols=28  Identities=14%  Similarity=0.357  Sum_probs=15.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999999999999999650
Q gi|254780412|r   62 HLREEITAIGKRLEKIEQQLADLELFIN   89 (94)
Q Consensus        62 k~R~~~e~Le~rl~~LE~kl~~le~~~~   89 (94)
                      ......+.|+.++..|..++.+|+-.++
T Consensus        60 ~~~~~~~ele~~~~~L~~~~~eLe~~l~   87 (89)
T 3bas_A           60 QLEDKVEELLSKNYHLENEVARLKKLVG   87 (89)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999999999999999999999998775


No 29 
>2jmh_A BLO T 5, mite allergen BLO T 5; DUST mites, group 5; NMR {Blomia tropicalis} PDB: 2jrk_A
Probab=23.77  E-value=36  Score=14.39  Aligned_cols=44  Identities=14%  Similarity=0.307  Sum_probs=25.0

Q ss_pred             HHHHHHHHHH--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999987--3985699999999999999999999999999999
Q gi|254780412|r   35 QIKIQRTLNS--MGVVRAEEIENVKRTTSHLREEITAIGKRLEKIE   78 (94)
Q Consensus        35 r~~~e~~l~k--ldLVtREEFdv~~~~l~k~R~~~e~Le~rl~~LE   78 (94)
                      +..+++-+-+  +|++-|=-||...+...=.-..+.+++++|.+.+
T Consensus        72 ~~~lerElKRtDLnilEkfNfE~al~t~~iL~KDLk~~e~kVKai~  117 (119)
T 2jmh_A           72 QGALERELKRTDLNILERFNYEEAQTLSKILLKDLKETEQKVKDIQ  117 (119)
T ss_dssp             HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999989700013599982699999999999988999999988771


No 30 
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=23.06  E-value=38  Score=14.31  Aligned_cols=27  Identities=7%  Similarity=0.245  Sum_probs=19.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999999999999999965
Q gi|254780412|r   62 HLREEITAIGKRLEKIEQQLADLELFI   88 (94)
Q Consensus        62 k~R~~~e~Le~rl~~LE~kl~~le~~~   88 (94)
                      ..++++++|+..|..|+.+|.++.+-+
T Consensus        68 q~q~~v~Elegei~~Lnq~Lqda~aev   94 (121)
T 3mq7_A           68 QGQKKVEELEGEITTLNHKLQDASAEV   94 (121)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             889999999989999999999999999


No 31 
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=22.38  E-value=39  Score=14.22  Aligned_cols=39  Identities=18%  Similarity=0.353  Sum_probs=23.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             569999999999999999999999999999999999999
Q gi|254780412|r   48 VRAEEIENVKRTTSHLREEITAIGKRLEKIEQQLADLEL   86 (94)
Q Consensus        48 VtREEFdv~~~~l~k~R~~~e~Le~rl~~LE~kl~~le~   86 (94)
                      +.-++.+-+++-.....+++..|++.+..++.++..+=.
T Consensus       101 ~~~~~~~~Lk~~~k~Lk~~i~~le~~l~ele~~l~~lll  139 (484)
T 3lss_A          101 VEQLCVLQLKQLSKDLSDQVAGLAKEAQQLEEERDKLML  139 (484)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             224469999999999999999999999999999999997


No 32 
>2nov_A DNA topoisomerase 4 subunit A; protein, PARC, TOPO IV, GRAM-positive bacteria, quinolone target, DNA binding, DNA cleavage; HET: DNA; 2.67A {Streptococcus pneumoniae} PDB: 3foe_A* 3fof_A* 3k9f_A* 3ksa_A* 3ksb_A* 3ltn_A*
Probab=21.73  E-value=40  Score=14.14  Aligned_cols=41  Identities=12%  Similarity=0.218  Sum_probs=22.9

Q ss_pred             CHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             69999999999999--999999999999999999999999650
Q gi|254780412|r   49 RAEEIENVKRTTSH--LREEITAIGKRLEKIEQQLADLELFIN   89 (94)
Q Consensus        49 tREEFdv~~~~l~k--~R~~~e~Le~rl~~LE~kl~~le~~~~   89 (94)
                      |-+.+|.+..|=.+  |+++++.|++.++.|+++++.|+..++
T Consensus       412 se~q~dyLL~M~L~~LT~~e~~kL~~E~~~l~~ei~~L~~il~  454 (496)
T 2nov_A          412 TEEQAEAIVTLQLYRLTNTDVVVLQEEEAELREKIAMLAAIIG  454 (496)
T ss_dssp             CHHHHHHHHTCBGGGGSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999999997589997589999999999999999999999968


No 33 
>3deu_A Transcriptional regulator SLYA; MARR, WING-helix, transcription regulator, activator, DNA-binding, repressor; HET: SAL; 2.30A {Salmonella typhimurium} SCOP: a.4.5.28
Probab=21.35  E-value=41  Score=14.09  Aligned_cols=47  Identities=19%  Similarity=0.236  Sum_probs=30.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             77999999999999999999873985699999999999999999999999
Q gi|254780412|r   23 FKDISKEAESFAQIKIQRTLNSMGVVRAEEIENVKRTTSHLREEITAIGK   72 (94)
Q Consensus        23 ~~~~~~Eie~~~r~~~e~~l~kldLVtREEFdv~~~~l~k~R~~~e~Le~   72 (94)
                      ...+-.++...+....+.+++.   .|-+|++....++.+....++.|+.
T Consensus       118 G~~~~~~~~~~~~~~~~~l~~~---ls~~e~~~l~~~L~~l~~nl~~l~~  164 (166)
T 3deu_A          118 AEPLIAEMEEVIHKTRGEILAG---ISSEEIELLIKLIAKLEHNIMELHS  164 (166)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHTT---CCHHHHHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999999999999999999948---9999999999999999999999872


No 34 
>1r48_A Proline/betaine transporter; osmosensor, cytoplasmic, coiled-coil, antiparallel, two- stranded homodimer, transport protein; NMR {Synthetic} SCOP: h.4.15.1
Probab=21.23  E-value=41  Score=14.08  Aligned_cols=21  Identities=14%  Similarity=0.371  Sum_probs=12.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999999999999
Q gi|254780412|r   64 REEITAIGKRLEKIEQQLADL   84 (94)
Q Consensus        64 R~~~e~Le~rl~~LE~kl~~l   84 (94)
                      -.+++.+..+|++||+|=..|
T Consensus         7 EqKIedId~qIaeLe~KR~~L   27 (33)
T 1r48_A            7 EQKIDDIDHEIADLQAKRTRL   27 (33)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
T ss_conf             998987999999999999999


No 35 
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A
Probab=20.99  E-value=41  Score=14.04  Aligned_cols=35  Identities=20%  Similarity=0.345  Sum_probs=18.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999999999999
Q gi|254780412|r   52 EIENVKRTTSHLREEITAIGKRLEKIEQQLADLEL   86 (94)
Q Consensus        52 EFdv~~~~l~k~R~~~e~Le~rl~~LE~kl~~le~   86 (94)
                      ..+.+..-+......+..+..++..|+.++..++.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~   38 (192)
T 1ca9_A            4 KIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEA   38 (192)
T ss_dssp             TTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999999999999999999999999999998640


Done!