HHsearch alignment for GI: 254780413 and conserved domain: COG2972

>COG2972 Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].
Probab=99.57  E-value=2.3e-12  Score=108.54  Aligned_cols=183  Identities=23%  Similarity=0.302  Sum_probs=122.3

Q ss_pred             HHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHH
Q ss_conf             85234531748999999999973126877888999999999998999999999999986643188520003317999999
Q gi|254780413|r  590 ARVSHEIRTPLTAIIGFSEVIKNQRFGPLGNPRYIEYANYIDRSGNLVLDIVNDLLDISKIESGKMNLHFEPVSLDEAVS  669 (820)
Q Consensus       590 a~vsHElrtPL~~I~g~~~~l~~~~~~~~~~~~~~~~l~~i~~~~~~l~~li~dlLd~srieaG~~~l~~~~vdl~~lv~  669 (820)
T Consensus       264 qi~pHfL~NtL~~I~~~~~~~-----------~~~~~~~~v~~l~~llR------~~l~~~--------~~~~~l~~E~~  318 (456)
T COG2972         264 QINPHFLYNTLETIRMLAEED-----------DPEEAAKVVKALSKLLR------YSLSNL--------DNIVTLEIELL  318 (456)
T ss_pred             CCCCHHHHHHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHHH------HHHHCC--------CCCCCHHHHHH
T ss_conf             126168999999999998735-----------79999999999999999------750065--------55341999999


Q ss_pred             HHHHHHHHHHHHCCEEEEEEECCCCCEE-EECHHHHHHHHHHHHHHHHHCC----CCCCEEEEEEEECCCCEEEEEEEEC
Q ss_conf             9999999998737808999737988468-9888999999999998888718----8978799999980499499999978
Q gi|254780413|r  670 EAISLVQLYANEKRILIRTSFANNIPRI-LADLRSVKQIALNILSNAIHFT----PSGGQIIISTTHTSNEEVILRVRDT  744 (820)
Q Consensus       670 ~~~~~~~~~a~~~~i~l~~~~~~~lp~v-~~D~~~l~Qvl~NLl~NAik~t----~~gg~v~v~~~~~~~~~v~i~V~Dt  744 (820)
T Consensus       319 ~~~kyl~iq~~r~~~~le~~~~i~~~~~~l~~p---~l~lqpLvENAi~hgi~~~~~~~~I~i~~~~~-~~~i~i~i~Dn  394 (456)
T COG2972         319 LIEKYLEIQKLRIGDRLEVPLPIDEELEPLIDP---KLVLQPLVENAIEHGIEPKRPGGSIAISAKKQ-DDVIQISISDN  394 (456)
T ss_pred             HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCH---HHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC-CCEEEEEECCC
T ss_conf             999999999819987999972037533202327---88988879999998620469995799999405-87999997769


Q ss_pred             CCCCCHHHHHHHCCCCEEECCCCCCCCCC-CCCHHHHHHHHHHHCCCE--EEEEEECCCCEEEEEEECCCC
Q ss_conf             89789888664237718734787666788-860689999999961986--999978899539999963577
Q gi|254780413|r  745 GVGMTNYELEKAMKPFGQIPNSQQIRGEG-TGLGLPLAKAMVDANMGK--FYIFSTPAKGTLIEIIFPLYD  812 (820)
Q Consensus       745 G~GI~~~~~~~iFepF~~~~~~~~~~~~G-tGLGLai~k~iVe~hgG~--i~v~S~pG~Gt~f~v~lP~~~  812 (820)
T Consensus       395 g~g~~~~~~~~~~~-----------~~~~r~giGL~Nv~~rl~~~~g~~~~~i~s~~~~gt~v~~~~~~~~  454 (456)
T COG2972         395 GPGIDEEKLEGLST-----------KGENRSGIGLSNVKERLKLYFGEPGLSIDSQPGKGTFVQIIIPKRE  454 (456)
T ss_pred             CCCCCHHHHHHHHH-----------CCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEHHC
T ss_conf             99958788866764-----------1577777358879999987189762179996489589999986301