HHsearch alignment for GI: 254780413 and conserved domain: COG4191
>COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].
Probab=100.00 E-value=2e-43 Score=335.93 Aligned_cols=240 Identities=22% Similarity=0.327 Sum_probs=212.0
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHCCHHHHHHHHHHH---HHHCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 6514444345765446688789999--99999985234531748999999999---973126877888999999999998
Q gi|254780413|r 559 HDISEWKQEKNKLSHAKKIAEKESS--HKSDFLARVSHEIRTPLTAIIGFSEV---IKNQRFGPLGNPRYIEYANYIDRS 633 (820)
Q Consensus 559 ~Dite~k~~e~el~~~~~~~e~~~~--~k~~fla~vsHElrtPL~~I~g~~~~---l~~~~~~~~~~~~~~~~l~~i~~~ 633 (820)
T Consensus 356 ~EIaer~~ae~~LR~~QdeLvQA~kLA~LGQmSA~iaHElNQPLaaiRt~adna~~lLer--g--r~e~a~~Nl~~I~~L 431 (603)
T COG4191 356 AEIAEREQAEAALRRAQDELVQAGKLAALGQMSAGIAHELNQPLAAIRTYADNARLLLER--G--RTEEARENLERISAL 431 (603)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC--C--CHHHHHHHHHHHHHH
T ss_conf 899988878999998789999877789988888887887437089998677789999875--8--867777679999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEECHHHHHHHHHHHHH
Q ss_conf 99999999999998664318852000331799999999999999987378089997379884689888999999999998
Q gi|254780413|r 634 GNLVLDIVNDLLDISKIESGKMNLHFEPVSLDEAVSEAISLVQLYANEKRILIRTSFANNIPRILADLRSVKQIALNILS 713 (820)
Q Consensus 634 ~~~l~~li~dlLd~srieaG~~~l~~~~vdl~~lv~~~~~~~~~~a~~~~i~l~~~~~~~lp~v~~D~~~l~Qvl~NLl~ 713 (820)
T Consensus 432 teRma~It~~Lk~FAr----k~~~a~~~v~l~~ai~~Al~ll~~R~~~~~~~l~~~~~~~~~~V~~~~iRLeQVLvNLl~ 507 (603)
T COG4191 432 TERMAAITAHLKSFAR----KSRDAAGPVSLREAIEGALELLRGRLRAAGVELELDLPDAPLWVMANEIRLEQVLVNLLQ 507 (603)
T ss_pred HHHHHHHHHHHHHHHC----CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCHHHHHHHHHHHHH
T ss_conf 9999889999999833----676666776579999999999887641367626504898775564132209999999999
Q ss_pred HHHHCCC--CCCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCE
Q ss_conf 8887188--97879999998049949999997889789888664237718734787666788860689999999961986
Q gi|254780413|r 714 NAIHFTP--SGGQIIISTTHTSNEEVILRVRDTGVGMTNYELEKAMKPFGQIPNSQQIRGEGTGLGLPLAKAMVDANMGK 791 (820)
Q Consensus 714 NAik~t~--~gg~v~v~~~~~~~~~v~i~V~DtG~GI~~~~~~~iFepF~~~~~~~~~~~~GtGLGLai~k~iVe~hgG~ 791 (820)
T Consensus 508 NALDA~~~~~~~~i~i~~~-~~~~~v~l~VrDnGpGi~~e~~~~lFePF~TtK~----~~~GLGLGLaIS~~i~~d~GGs 582 (603)
T COG4191 508 NALDAMAGQEDRRLSIRAQ-REGGQVVLTVRDNGPGIAPEALPHLFEPFFTTKP----VGKGLGLGLAISQNIARDLGGS 582 (603)
T ss_pred HHHHHHCCCCCCEEEEEEE-ECCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCC----CCCCCCHHHHHHHHHHHHHCCE
T ss_conf 8999845887871699987-1598699998269999897899861377503676----6677560289899899981880
Q ss_pred EEEEEECCCCEEEEEEECCC
Q ss_conf 99997889953999996357
Q gi|254780413|r 792 FYIFSTPAKGTLIEIIFPLY 811 (820)
Q Consensus 792 i~v~S~pG~Gt~f~v~lP~~ 811 (820)
T Consensus 583 L~v~n~~~~Ga~F~i~L~~a 602 (603)
T COG4191 583 LEVANHPEGGASFTIELRRA 602 (603)
T ss_pred EEEECCCCCCEEEEEEEECC
T ss_conf 79402788844899996157