HHsearch alignment for GI: 254780413 and conserved domain: COG4585
>COG4585 Signal transduction histidine kinase [Signal transduction mechanisms].
Probab=99.64 E-value=4.1e-13 Score=113.95 Aligned_cols=190 Identities=19% Similarity=0.280 Sum_probs=116.3
Q ss_pred HHHHHHHCCHHHHHHHHHHH---HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHH
Q ss_conf 85234531748999999999---973126877888999999999998999999999999986643188520003317999
Q gi|254780413|r 590 ARVSHEIRTPLTAIIGFSEV---IKNQRFGPLGNPRYIEYANYIDRSGNLVLDIVNDLLDISKIESGKMNLHFEPVSLDE 666 (820)
Q Consensus 590 a~vsHElrtPL~~I~g~~~~---l~~~~~~~~~~~~~~~~l~~i~~~~~~l~~li~dlLd~srieaG~~~l~~~~vdl~~ 666 (820)
T Consensus 172 ~RIARdLHDsv~q~L~~i~m~~~~~~~-~~~~~~e~~~~~l~~i~~~~~---e~l~evR~~v~------~Lrp~~l~~~~ 241 (365)
T COG4585 172 NRIARDLHDSVGQSLTAISMLLALLLL-LADEDAEKAQEELKEIEKLLR---EALQEVRALVR------DLRPVELEGLG 241 (365)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHH---HHHHHHHHHHH------HCCCHHHHHHH
T ss_conf 998898506687999999999999887-212684889999999999999---99999999999------71973221211
Q ss_pred HHHHHHHHHHHHHHHCCEEEEEEECCCCCEE-EECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEECC
Q ss_conf 9999999999998737808999737988468-988899999999999888871889787999999804994999999788
Q gi|254780413|r 667 AVSEAISLVQLYANEKRILIRTSFANNIPRI-LADLRSVKQIALNILSNAIHFTPSGGQIIISTTHTSNEEVILRVRDTG 745 (820)
Q Consensus 667 lv~~~~~~~~~~a~~~~i~l~~~~~~~lp~v-~~D~~~l~Qvl~NLl~NAik~t~~gg~v~v~~~~~~~~~v~i~V~DtG 745 (820)
T Consensus 242 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~l~rivQEaltN~~rHa~A~-~v~V~l~~~~~-~l~l~V~DnG 319 (365)
T COG4585 242 LVEALRALLADFEERTGITVDLSLGSELERLPPEAEDALFRIVQEALTNAIRHAQAT-EVRVTLERTDD-ELRLEVIDNG 319 (365)
T ss_pred HHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC-EEEEEEEECCC-EEEEEEEECC
T ss_conf 799999999998775083788615764467996899999999999998998757845-69999998298-8999999899
Q ss_pred CCCCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECC
Q ss_conf 97898886642377187347876667888606899999999619869999788995399999635
Q gi|254780413|r 746 VGMTNYELEKAMKPFGQIPNSQQIRGEGTGLGLPLAKAMVDANMGKFYIFSTPAKGTLIEIIFPL 810 (820)
Q Consensus 746 ~GI~~~~~~~iFepF~~~~~~~~~~~~GtGLGLai~k~iVe~hgG~i~v~S~pG~Gt~f~v~lP~ 810 (820)
T Consensus 320 ~Gf~~~~~-------------------~~~~GL~~mreRv~~lgG~l~i~S~~g~Gt~i~i~lPl 365 (365)
T COG4585 320 VGFDPDKE-------------------GGGFGLLGMRERVEALGGTLTIDSAPGQGTTVTITLPL 365 (365)
T ss_pred CCCCCCCC-------------------CCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEC
T ss_conf 78897645-------------------77766766999999869989998559997799999509