HHsearch alignment for GI: 254780413 and conserved domain: PRK10060
>PRK10060 RNase II stability modulator; Provisional.
Probab=99.41 E-value=1.8e-11 Score=102.02 Aligned_cols=122 Identities=11% Similarity=0.044 Sum_probs=88.9
Q ss_pred CCCCCCCCCEEEEEEECCCCCEEEECHHHHHHHCCCHHHHCCCCHHHHHCCCCCCCH--HHHHHHHHCCCCCCCEEEEEC
Q ss_conf 435577898105999979990999667899662899789749968882040168823--899999863796167168861
Q gi|254780413|r 74 FVFDPIPRTVRFTWNIDAHGYLKEISEELPKTIGNYAFKMIGMRLCDVSDILHIDPN--NHIGDLLKRQNTWYGKTTLWP 151 (820)
Q Consensus 74 ~~~~~~~~~~rfvw~~D~eGr~~~vn~~~~~~~G~~~~e~iGr~~~e~~~~~~~~p~--~~i~~~l~~~~~~~~~~~~~~ 151 (820)
T Consensus 115 ~Vfe~a~eg---I~ItD~~~~I~~vN~af~~iTGy~~~eviG~n~~~l~~s~~~~~~~~~~~~~~l~~~~~w~gE~w~r~ 191 (663)
T PRK10060 115 QVVSEANSV---IVILDSRGNIQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRRNIRGFFRSGNAYEVERWIKT 191 (663)
T ss_pred HHHHCCCCE---EEEECCCCCEEEEHHHHHHHHCCCHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf 998545864---99997999988786797788689999918998799835755448899999999974981898888740
Q ss_pred CCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHH
Q ss_conf 479883799998630015688736305566898522103779999986324
Q gi|254780413|r 152 IEGTNLYVPIDLAALPIYSRNREFSGFRGFGIVHVNRVDNDPRALGKRLDK 202 (820)
Q Consensus 152 ~~g~~~~~~v~ls~~Pv~d~~g~~~G~rG~gv~r~~~~~~~~~~~~~~l~~ 202 (820)
T Consensus 192 k~G~~~~~~~~---~~v~~~~~~~~~~-~i~~f~DITe~k~~ee~l~~lA~ 238 (663)
T PRK10060 192 RKGQRLFLFRN---KFVHSGSGKNEIF-LICSGTDITEERRAQERLRILAN 238 (663)
T ss_pred CCCCEEEEEEE---EEEECCCCCEEEE-EEEEEEECCHHHHHHHHHHHHHC
T ss_conf 58964579887---8776078970699-99988880489999999998736