HHsearch alignment for GI: 254780413 and conserved domain: PRK10060
>PRK10060 RNase II stability modulator; Provisional.
Probab=99.12 E-value=3.1e-09 Score=85.57 Aligned_cols=163 Identities=10% Similarity=0.044 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEC-CEEEEECHHHHHHHCCCCHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf 4565455565789999634997899709-958872068898837984477224676112202455451356789998750
Q gi|254780413|r 311 LSAYFDEGENLTPETVDKCPIPFFVYSH-GNLFYANPSFLLLTKYKSVDDIEIAGGLSTLLDAPKLSDNNAIKPVMLYRS 389 (820)
Q Consensus 311 ~~~~~~~~~~~~~~ild~lp~gv~i~~~-gri~~~N~a~~~l~G~~~~e~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 389 (820)
T Consensus 102 ~~~~~~~~l~lAa~Vfe~a~egI~ItD~~~~I~~vN~af~~iTGy~~~eviG~n~--~~l~~s~~-~~~~~~~~~~~~l~ 178 (663)
T PRK10060 102 VARDLSHGLSFAEQVVSEANSVIVILDSRGNIQRFNRLCEEYTGLKEHDVIGQSV--FKLFMSRR-EAAASRRNIRGFFR 178 (663)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEHHHHHHHHCCCHHHHCCCCH--HHHHCCCC-CCHHHHHHHHHHHH
T ss_conf 8999998879999998545864999979999887867977886899999189987--99835755-44889999999997
Q ss_pred CCCEEEEEEEEEEEEECCCEEEEEEEEECCCCCCCHHH-HHHHHHHHHHHHHHHHHHHHHHH---------------HHH
Q ss_conf 58665599999999738944999999632433320023-33445678888999999999999---------------999
Q gi|254780413|r 390 DRTCIAASARLHTIQWNRENSLAMTFIPFEKANQFPEN-MPQNGIEPEDVDTRINKRKMEIE---------------VMQ 453 (820)
Q Consensus 390 ~g~~~~~~~~~~~i~~~g~~~~~l~~~~~~~~d~~~~~-~~~~~~~~dit~~~~~~~~L~~~---------------~~~ 453 (820)
T Consensus 179 ~~~~--w~gE~w~r~k~G~~~~~~~~--~~v~~~~~~~~~~~i~~f~DITe~k~~ee~l~~lA~~D~LTgLPNR~~~~~r 254 (663)
T PRK10060 179 SGNA--YEVERWIKTRKGQRLFLFRN--KFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAIQEL 254 (663)
T ss_pred CCCC--EEEEEEEEECCCCEEEEEEE--EEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
T ss_conf 4981--89888874058964579887--8776078970699999888804899999999987367742386628999999
Q ss_pred HHHHHHHH---CCHHEEECCCCEEEEEHHHH
Q ss_conf 99999742---20430785998387215689
Q gi|254780413|r 454 LCSILEAT---SDGIAIINREGIILSTNRAV 481 (820)
Q Consensus 454 L~~ile~~---~~gI~~~D~~G~i~~~N~a~ 481 (820)
T Consensus 255 L~~ai~~~~~~~~AvlfiDLD~-FK~INDt~ 284 (663)
T PRK10060 255 IDHAIAQADNNQVGIVYLDLDN-FKKVNDAY 284 (663)
T ss_pred HHHHHHHCCCCCEEEEEEECCC-CCHHHHCC
T ss_conf 9999971769938999997867-68344662