HHsearch alignment for GI: 254780413 and conserved domain: PRK10547
>PRK10547 chemotaxis protein CheA; Provisional.
Probab=99.80 E-value=7e-17 Score=141.57 Aligned_cols=166 Identities=20% Similarity=0.285 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHH--CCEEEEEEECCCCCEEEECHHH---HHHH
Q ss_conf 8999999999999986643188520003317999999999999999873--7808999737988468988899---9999
Q gi|254780413|r 633 SGNLVLDIVNDLLDISKIESGKMNLHFEPVSLDEAVSEAISLVQLYANE--KRILIRTSFANNIPRILADLRS---VKQI 707 (820)
Q Consensus 633 ~~~~l~~li~dlLd~srieaG~~~l~~~~vdl~~lv~~~~~~~~~~a~~--~~i~l~~~~~~~lp~v~~D~~~---l~Qv 707 (820)
T Consensus 314 ~~~~l~r~~~dLq~~v--------m~~RMvP~~~lf~r~~R~VRdlar~~gK~V~L~i~--G~--dtelDr~Ile~L~dP 381 (662)
T PRK10547 314 SMGQLQRNARDLQESV--------MSIRMMPMEYVFSRFPRLVRDLAGKLGKQVELTLV--GS--STELDKSLIERIIDP 381 (662)
T ss_pred HHHHHHHHHHHHHHHH--------HHHCCEEHHHHHHHHHHHHHHHHHHHCCEEEEEEE--CC--CEEEHHHHHHHHHHH
T ss_conf 9999999999999999--------98625218998888789999999986982599996--68--677719999988879
Q ss_pred HHHHHHHHHHCC------------CCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHH---------------------H
Q ss_conf 999998888718------------8978799999980499499999978897898886---------------------6
Q gi|254780413|r 708 ALNILSNAIHFT------------PSGGQIIISTTHTSNEEVILRVRDTGVGMTNYEL---------------------E 754 (820)
Q Consensus 708 l~NLl~NAik~t------------~~gg~v~v~~~~~~~~~v~i~V~DtG~GI~~~~~---------------------~ 754 (820)
T Consensus 382 L~HLlRNAvDHGIE~peeR~a~GKp~~G~I~l~a~-~~g~~v~I~v~DDGrGiD~e~Ir~kAv~kGL~~~e~lsd~e~~~ 460 (662)
T PRK10547 382 LTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAE-HQGGNICIEVTDDGAGLNRERILAKAASQGLAVSENMSDDEVGM 460 (662)
T ss_pred HHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEEEE-ECCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
T ss_conf 99998742430489988998759997279999999-85999999998189998999999999984999853389999999
Q ss_pred HHCCC-CEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCC
Q ss_conf 42377-187347876667888606899999999619869999788995399999635777
Q gi|254780413|r 755 KAMKP-FGQIPNSQQIRGEGTGLGLPLAKAMVDANMGKFYIFSTPAKGTLIEIIFPLYDT 813 (820)
Q Consensus 755 ~iFep-F~~~~~~~~~~~~GtGLGLai~k~iVe~hgG~i~v~S~pG~Gt~f~v~lP~~~~ 813 (820)
T Consensus 461 LIF~PGFSTa~~V-t-~lSGRGVGmDVV~~~v~~l~G~v~v~S~~G~GT~F~l~lPlTla 518 (662)
T PRK10547 461 LIFAPGFSTAEQV-T-DVSGRGVGMDVVKRNIQEMGGHVEIQSKQGTGTTIRILLPLTLA 518 (662)
T ss_pred HHHCCCCCCCCCC-C-CCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCHHH
T ss_conf 9717998623223-5-68886646899999999829989999608980799997887899