HHsearch alignment for GI: 254780413 and conserved domain: PRK10600
>PRK10600 nitrate/nitrite sensor protein NarX; Provisional.
Probab=99.73 E-value=6e-14 Score=120.12 Aligned_cols=193 Identities=16% Similarity=0.190 Sum_probs=136.2
Q ss_pred HHHHHHH----CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHH
Q ss_conf 8523453----174899999999997312687788899999999999899999999999998664318852000331799
Q gi|254780413|r 590 ARVSHEI----RTPLTAIIGFSEVIKNQRFGPLGNPRYIEYANYIDRSGNLVLDIVNDLLDISKIESGKMNLHFEPVSLD 665 (820)
Q Consensus 590 a~vsHEl----rtPL~~I~g~~~~l~~~~~~~~~~~~~~~~l~~i~~~~~~l~~li~dlLd~srieaG~~~l~~~~vdl~ 665 (820)
T Consensus 363 ~~IARELHDslaQ~Ls~Lkiq~~~l~~~~--~~~~~~~~~~l~~i~~~~~~a~~~lReLl~~fR~-------~l~~~~l~ 433 (569)
T PRK10600 363 ATIARELHDSIAQSLSCMKMQVSCLQMQG--DALPESSRELLSQIRNELNASWAQLRELLTTFRL-------QLTEPGLR 433 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CCCCCCHH
T ss_conf 99999988887222789999999999730--5798889999999999999999999999998355-------77756679
Q ss_pred HHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEC-HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEC
Q ss_conf 99999999999998737808999737988468988-89999999999988887188978799999980499499999978
Q gi|254780413|r 666 EAVSEAISLVQLYANEKRILIRTSFANNIPRILAD-LRSVKQIALNILSNAIHFTPSGGQIIISTTHTSNEEVILRVRDT 744 (820)
Q Consensus 666 ~lv~~~~~~~~~~a~~~~i~l~~~~~~~lp~v~~D-~~~l~Qvl~NLl~NAik~t~~gg~v~v~~~~~~~~~v~i~V~Dt 744 (820)
T Consensus 434 ~aL~~~i~~~~~~---~g~~i~l~~~~~~~~l~~~~~i~l~rIvqEALsNv~KHA~A~-~v~V~l~~~-~~~~~l~I~Dd 508 (569)
T PRK10600 434 PALEASCEEFSAR---FGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHAQAS-EVVVTVAQN-DNQVKLSVQDN 508 (569)
T ss_pred HHHHHHHHHHHHH---CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC-EEEEEEEEC-CCEEEEEEEEC
T ss_conf 9999999999976---097799995588667987899999999999999999708998-799999976-99899999889
Q ss_pred CCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCC
Q ss_conf 8978988866423771873478766678886068999999996198699997889953999996357778
Q gi|254780413|r 745 GVGMTNYELEKAMKPFGQIPNSQQIRGEGTGLGLPLAKAMVDANMGKFYIFSTPAKGTLIEIIFPLYDTS 814 (820)
Q Consensus 745 G~GI~~~~~~~iFepF~~~~~~~~~~~~GtGLGLai~k~iVe~hgG~i~v~S~pG~Gt~f~v~lP~~~~~ 814 (820)
T Consensus 509 G~Gf~~~------------------~~~~~h~GL~iMrERa~~lgG~l~i~s~p~~GT~V~l~f~P~~~~ 560 (569)
T PRK10600 509 GCGVPEN------------------AERSNHYGLIIMRDRAQSLRGDCSVRRRESGGTEVVVTFIPEKTF 560 (569)
T ss_pred CCCCCCC------------------CCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCC
T ss_conf 9898988------------------888999781599999997699899986699958999997589887