HHsearch alignment for GI: 254780413 and conserved domain: PRK10820
>PRK10820 DNA-binding transcriptional regulator TyrR; Provisional.
Probab=97.36 E-value=0.0068 Score=39.15 Aligned_cols=109 Identities=14% Similarity=0.124 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHCCHHEEECCCCEEEEEHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 99999999997422043078599838721568998848960320786443345645627789999988606984022348
Q gi|254780413|r 449 IEVMQLCSILEATSDGIAIINREGIILSTNRAVSKLFGYPVEDILRKPFTVFLEQNTPSVMNHYLTEILSLDLRQTLEKI 528 (820)
Q Consensus 449 ~~~~~L~~ile~~~~gI~~~D~~G~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (820)
T Consensus 77 r~~~~L~alLdsl~dgV~svD~~G~I~~~N~aa~~i~~~~~~~~~G~~i~~~~~~~~~~---~----~l~~~~~~~~~~~ 149 (513)
T PRK10820 77 REHLALSALLEALPEPVLSIDMKSKVELANPASCQLFGQSEERLRNHTAAQLINGFNFL---R----WLESEPQDSHNEH 149 (513)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCEEEEHHHHHHHHCCCHHHHCCCCHHHHCCCCCHH---H----HHHCCCCCCCCEE
T ss_conf 68889999997389978998599819976399999849896887797999971875699---9----9862898766359
Q ss_pred EEEECCCCCEEEEEEEEEECCCCC------EEEEEEEEHHHHHHH
Q ss_conf 887638972899999988717887------399998651444434
Q gi|254780413|r 529 TLGSTKEEKLLSLRIIIKKLPFSS------CYSLTMHDISEWKQE 567 (820)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~Dite~k~~ 567 (820)
T Consensus 150 ~~~---~~~~~~~~~~pi~~~~~~~~~~~~GaV~~lk~~~~~~~~ 191 (513)
T PRK10820 150 VVI---NGQNFLMEITPVYLQDENDQHVLTGAVVMLRSTIRMGRQ 191 (513)
T ss_pred EEE---CCCEEEEEEEEEEECCCCCCCEEEEEEEEECCHHHHHHH
T ss_conf 987---696789997678752778860366689882468999999